CAZyme3D

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Entry ID

Information for CAZyme ID: AAY81158.1

Basic Information

GenBank IDAAY81158.1
FamilyGH12
Sequence Length311
UniProt IDQ4J7S3(100,100)Download
Average pLDDT?91.87
CAZy50 ID121802
CAZy50 RepNo, AWR98635.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID330779
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSulfolobus
SpeciesSulfolobus acidocaldarius

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLILLSAIFL  IIFITIIVFI  VLLPNYSKND  CIITLGNTYG  GEFSILGKYQ  SDSTYAIGMV60
YSKNASLFVS  PFLWNLKTAL  GYTNLTYRGN  TLVVNVNFTN  FEKINSNLQV  DGYPGVMYGQ120
EDWFPFAGRT  LMPSCFVLPV  KVISLPNFNS  TLSYKINDNR  GIIDDFSYDI  WLTQNPNTTY180
IQFPDVEIMI  WLYHNETLSD  YFVKAGVMSV  NIMVNGTVIQ  DDFTVYILPH  TGSSNGWIGV240
YYISQLELSA  GNITVPMSTL  IKDSFNYIRG  VFPDLQTSAY  YLNAIQVGME  FNDINGVVNV300
GYTLYNWTIT  I311

Predicted 3D structure by AlphaFold2 with pLDDT = 91.87 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH12(138-310)

MLILLSAIFL  IIFITIIVFI  VLLPNYSKND  CIITLGNTYG  GEFSILGKYQ  SDSTYAIGMV60
YSKNASLFVS  PFLWNLKTAL  GYTNLTYRGN  TLVVNVNFTN  FEKINSNLQV  DGYPGVMYGQ120
EDWFPFAGRT  LMPSCFVLPV  KVISLPNFNS  TLSYKINDNR  GIIDDFSYDI  WLTQNPNTTY180
IQFPDVEIMI  WLYHNETLSD  YFVKAGVMSV  NIMVNGTVIQ  DDFTVYILPH  TGSSNGWIGV240
YYISQLELSA  GNITVPMSTL  IKDSFNYIRG  VFPDLQTSAY  YLNAIQVGME  FNDINGVVNV300
GYTLYNWTIT  I311

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help