Information for CAZyme ID: AAW31751.2
Basic Information
GenBank ID | AAW31751.2 |
Family | CBM0, CBM40, GH33 |
Sequence Length | 807 |
UniProt ID | Q5IB64(100,100)![]() |
Average pLDDT? | 93.63 |
CAZy50 ID | 26577 |
CAZy50 Rep | No, QHA21694.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 666 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Vibrionales |
Family | Vibrionaceae |
Genus | Vibrio |
Species | Vibrio cholerae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MSIKMTSQRR RASIHKETDS NIKGVDMRFK NVKKTALMLA MFGMATSSNA ALFDYNATGD | 60 |
TEFDSPAKQG WMQDNTNNGS GVLTNADGMP AWLVQGNGGR AQWTYSLSTN QHAQASSFGW | 120 |
RMTTEMKVLS GGMITNYYAN GTQRVLPIIS LDSSGNLVVE FEGQTGRTIL ATGTAATEYH | 180 |
KFELVFLPGS NPSASFYFDG KLIRDNIQPT ASKQNMIVWG NGSSNTDGVA AYRDIKFEIQ | 240 |
GDVIFRGPDR IPSIVASSVT PGVVTAFAEK RVGGGDPGAL SNTNDIITRT SRDGGITWDT | 300 |
ELNLTEQINV SDEFDFSDPR PIYDPSTNTV LVSYARWPTD AAQNGDRIKP WMPNGIFYSV | 360 |
YDVASGNWRA PIDVTDQVKE RSFQIAGWGG SELYRRNTNL NSQQDWQSNA KIRIVDGAAN | 420 |
QIQVADGGRK YVFTLSIDES GSLVANLNGV SDPIILQSER AKVHSFHDYE LQYSALNRST | 480 |
TLFVDGQAIT TWTGEVSQEN NIQFGNADAQ IDGRLHVQNI ALTQQGQNLV EFDAFYLAQQ | 540 |
TPEVEKDLEK LGWTKIKTGN TMSLYGNASV NPGPGHGITL TRQQNISGSQ NGRLIYPAIV | 600 |
LDRFFLNVMS IYSDDGGSNW QTGSTLPIPF RWKSSSILET LEPSEADMVE LQNGDLLLTA | 660 |
RLDFNQIVNG VNYSPRQQFL SKDGGITWSL LEANNANVFS NISTGTVDAS ITRFEQSDGS | 720 |
HFLLFTNPQG NPAGTNGRQN LGLWFSFDEG VTWKGPIQLV NGASAYSDIY QLDSENAIVI | 780 |
VETDNSNMRI LRMPITLLKQ KLTLSQN | 807 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.63 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH33(244-794)
MSIKMTSQRR RASIHKETDS NIKGVDMRFK NVKKTALMLA MFGMATSSNA ALFDYNATGD | 60 |
TEFDSPAKQG WMQDNTNNGS GVLTNADGMP AWLVQGNGGR AQWTYSLSTN QHAQASSFGW | 120 |
RMTTEMKVLS GGMITNYYAN GTQRVLPIIS LDSSGNLVVE FEGQTGRTIL ATGTAATEYH | 180 |
KFELVFLPGS NPSASFYFDG KLIRDNIQPT ASKQNMIVWG NGSSNTDGVA AYRDIKFEIQ | 240 |
GDVIFRGPDR IPSIVASSVT PGVVTAFAEK RVGGGDPGAL SNTNDIITRT SRDGGITWDT | 300 |
ELNLTEQINV SDEFDFSDPR PIYDPSTNTV LVSYARWPTD AAQNGDRIKP WMPNGIFYSV | 360 |
YDVASGNWRA PIDVTDQVKE RSFQIAGWGG SELYRRNTNL NSQQDWQSNA KIRIVDGAAN | 420 |
QIQVADGGRK YVFTLSIDES GSLVANLNGV SDPIILQSER AKVHSFHDYE LQYSALNRST | 480 |
TLFVDGQAIT TWTGEVSQEN NIQFGNADAQ IDGRLHVQNI ALTQQGQNLV EFDAFYLAQQ | 540 |
TPEVEKDLEK LGWTKIKTGN TMSLYGNASV NPGPGHGITL TRQQNISGSQ NGRLIYPAIV | 600 |
LDRFFLNVMS IYSDDGGSNW QTGSTLPIPF RWKSSSILET LEPSEADMVE LQNGDLLLTA | 660 |
RLDFNQIVNG VNYSPRQQFL SKDGGITWSL LEANNANVFS NISTGTVDAS ITRFEQSDGS | 720 |
HFLLFTNPQG NPAGTNGRQN LGLWFSFDEG VTWKGPIQLV NGASAYSDIY QLDSENAIVI | 780 |
VETDNSNMRI LRMPITLLKQ KLTLSQN | 807 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.