CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AAT71946.1

Basic Information

GenBank IDAAT71946.1
FamilyGT14
Sequence Length423
UniProt IDQ6DBE8(100,100)Download
Average pLDDT?87.32
CAZy50 ID5967
CAZy50 RepNo, VDD16764.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3702
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderBrassicales
FamilyBrassicaceae
GenusArabidopsis
SpeciesArabidopsis thaliana

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLLSQDHKIL  FNGVRKYVIM  EKKYVFSFVI  TSLVCVVLLA  TSFNIGLMSS  LRPPINGTLS60
SFPKNDSNVV  GKQPREDDKL  PRFAYLVSGS  KGDLESLWRT  LRALYHPRNQ  YIVHLDLESP120
VDERSELASR  ISNDPMYSKA  GNVYMITKAN  LVTYTGPTMV  ANTLHACAIL  LKRTPDWDWF180
INLSASDYPL  VTQDDLIHTF  STLDRNLNFI  EHTSSLGWKY  KKRAMPLIID  PGLYMLNKSN240
VLLVRPNRSL  PSAFKLFTAW  MALSHAFVEY  IIYGWDNLPR  TLLMYYTNFV  SSPEGYFHTV300
ICNVPEFSKT  AVNHDLHYIA  WDKPPRQHPR  MLSQRDMGKM  ISSGSAFGRK  FRRNDTVLDK360
IDKELLIRIN  EDGFTPGGWC  GGKPECSVVE  DVARIRPSSG  AVRLKELVDR  LVTEAKLGKN420
QCV423

Predicted 3D structure by AlphaFold2 with pLDDT = 87.32 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT14(83-336)

MLLSQDHKIL  FNGVRKYVIM  EKKYVFSFVI  TSLVCVVLLA  TSFNIGLMSS  LRPPINGTLS60
SFPKNDSNVV  GKQPREDDKL  PRFAYLVSGS  KGDLESLWRT  LRALYHPRNQ  YIVHLDLESP120
VDERSELASR  ISNDPMYSKA  GNVYMITKAN  LVTYTGPTMV  ANTLHACAIL  LKRTPDWDWF180
INLSASDYPL  VTQDDLIHTF  STLDRNLNFI  EHTSSLGWKY  KKRAMPLIID  PGLYMLNKSN240
VLLVRPNRSL  PSAFKLFTAW  MALSHAFVEY  IIYGWDNLPR  TLLMYYTNFV  SSPEGYFHTV300
ICNVPEFSKT  AVNHDLHYIA  WDKPPRQHPR  MLSQRDMGKM  ISSGSAFGRK  FRRNDTVLDK360
IDKELLIRIN  EDGFTPGGWC  GGKPECSVVE  DVARIRPSSG  AVRLKELVDR  LVTEAKLGKN420
QCV423

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help