CAZyme3D

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Entry ID

Information for CAZyme ID: AAO78761.1

Basic Information

GenBank IDAAO78761.1
FamilyGH43_19, GH43_9
Sequence Length811
UniProt IDQ8A1K5(100,100)Download
Average pLDDT?94.57
CAZy50 ID9816
CAZy50 RepNo, BDI75469.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID226186
KingdomBacteria
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides thetaiotaomicron

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKLLLFILL  VCATVQAYSQ  EYPKVVLSGD  YPDPSVMRDG  EDYYMTHSPF  YYAPGFLIWH60
SRDLMNWEPV  CRVMPEYEGS  AMAPDLLKYK  GKYYIYYPAK  GTNWVIWAND  IKGPWSKPID120
LKVSGIDPGH  IADQEGNRYL  YVDKGEVIRL  TDDGLATIGQ  KQKVYEGWRY  PNHWETECMC180
LESPKLNYHN  GYYYLTSAQG  GTAGPATSHM  AVAARSKSVT  GPWENSPYNP  VVHTYSAHDN240
WWSKGHGTLI  DDVNGNWWIV  YHAYAKGYHT  LGRSTLIEPI  EWTADGWYRT  KSTATPIKTD300
PSIKHGLSLS  DDFEGPEPGL  QWTFWKEYAP  QSLSFKKQTL  WIDAKGSTPS  DARLLLATAE360
DKNYETQVEV  NVGKGNTAGL  LLYYSEKAYA  GVVSDGKNFT  IYRNAENSFT  LPNKLGKRFL420
AKIQNQGNSV  RIAVSKDGKE  WTTLVENMDV  SQLHHNNYGG  FYALRIGLLS  SGKGSAGFRQ480
FRYRNAIPQE  KDMGAYLMVF  HKDETHSLYM  AVSDDGYTFT  ALNDGKPVIA  GDTIALQKGI540
RDPHIFRGPD  GAFYLSMTDL  HIYAQKDGFR  DTEWERDGKE  YGWGNNRGLV  LMKSWDLINW600
KRTNARFDLL  SAGLGEIGCV  WAPEVTYDDK  KGKLMIYFTM  RFKNEANKLY  YVYVNDDFDR660
IETLPQILFE  YPNEKISAID  GDITKVGDRY  RMFYVSHDGG  AGIKQAVSDR  INGDYEYDPR720
WYDFEPRACE  APNLWKRIGE  DKWVLMYDVY  GINPHNFAFI  ETSDFVNFKN  LGRFNEGVMK780
TTNFSSPKHG  AVIHLTKEEA  AKLRSHWENR  K811

Predicted 3D structure by AlphaFold2 with pLDDT = 94.57 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH43_9(25-288)+CBM91(310-485)+GH32(431-557)+GH43_19(537-792)

MKKLLLFILL  VCATVQAYSQ  EYPKVVLSGD  YPDPSVMRDG  EDYYMTHSPF  YYAPGFLIWH60
SRDLMNWEPV  CRVMPEYEGS  AMAPDLLKYK  GKYYIYYPAK  GTNWVIWAND  IKGPWSKPID120
LKVSGIDPGH  IADQEGNRYL  YVDKGEVIRL  TDDGLATIGQ  KQKVYEGWRY  PNHWETECMC180
LESPKLNYHN  GYYYLTSAQG  GTAGPATSHM  AVAARSKSVT  GPWENSPYNP  VVHTYSAHDN240
WWSKGHGTLI  DDVNGNWWIV  YHAYAKGYHT  LGRSTLIEPI  EWTADGWYRT  KSTATPIKTD300
PSIKHGLSLS  DDFEGPEPGL  QWTFWKEYAP  QSLSFKKQTL  WIDAKGSTPS  DARLLLATAE360
DKNYETQVEV  NVGKGNTAGL  LLYYSEKAYA  GVVSDGKNFT  IYRNAENSFT  LPNKLGKRFL420
AKIQNQGNSV  RIAVSKDGKE  WTTLVENMDV  SQLHHNNYGG  FYALRIGLLS  SGKGSAGFRQ480
FRYRNAIPQE  KDMGAYLMVF  HKDETHSLYM  AVSDDGYTFT  ALNDGKPVIA  GDTIALQKGI540
RDPHIFRGPD  GAFYLSMTDL  HIYAQKDGFR  DTEWERDGKE  YGWGNNRGLV  LMKSWDLINW600
KRTNARFDLL  SAGLGEIGCV  WAPEVTYDDK  KGKLMIYFTM  RFKNEANKLY  YVYVNDDFDR660
IETLPQILFE  YPNEKISAID  GDITKVGDRY  RMFYVSHDGG  AGIKQAVSDR  INGDYEYDPR720
WYDFEPRACE  APNLWKRIGE  DKWVLMYDVY  GINPHNFAFI  ETSDFVNFKN  LGRFNEGVMK780
TTNFSSPKHG  AVIHLTKEEA  AKLRSHWENR  K811

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help

qseqidqlensseqidpidentevaluelengthqstartqendqcovhspscovhsp
AAO78761.1811BDI75469.173.60.0807180799.572.0