CAZyme3D

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Entry ID

Information for CAZyme ID: AAM36318.1

Basic Information

GenBank IDAAM36318.1
FamilyGH3
Sequence Length748
UniProt IDQ8PMI0(100,100)Download
Average pLDDT?93.14
CAZy50 ID14241
CAZy50 RepNo, CAQ46374.1
Structure Cluster-
EC Number(s)3.2.1.74
Substrates(s)beta-glucan

Taxonomy

Tax ID190486
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderXanthomonadales
FamilyXanthomonadaceae
GenusXanthomonas
SpeciesXanthomonas citri

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKPFTAHQNR  PRPLVLAVVM  GLGVAFAAPL  AVAQGAPSSQ  PWMDTALTPD  QRADRLLAQM60
SEDEKFQMLR  SYFGLGTDKI  PKPEGALGSA  GYVPGIPRLG  IPAQQLADAG  VGVTNPGGIR120
KGDYATAMPS  GPSTASSWNR  QLAYTGGKTM  GRESWQQGFN  VLLAGSVNLQ  RDPRNGRNFE180
YAGEDPLLAG  TMVGESIRGV  QSEHVLSTMK  HFALNDMETR  RNFHSAQIGE  QAMHESDLLA240
FEIALKIGDP  ASVMCSYNKI  NGIYGCEHDY  LLNQVLKQEW  KYPGYVMSDW  GGVHSGSKAA300
LAGLDQQSAG  EVFDAAVFFD  APLRMAVSAG  VVPRARFDDM  VKRVLRSLFA  HGAFDHPTQR360
QPIDGKAGLL  AAQRVAEEGS  VLLRNEQAAL  PLSKDVRRIA  VIGGYADKGV  MSGGGSSRVD420
YTINGGNAVP  GITPTTWPGP  VIIHPSSPLQ  ALRAALPNVQ  IDYLDGTDRA  AAARAAKAAD480
VAIVFATQWA  AESVDLPDMR  LPDNQDALIE  TVAKANPKTT  VVLETNGPVR  MPWAERVPAV540
LQAWYPGIGG  GEAIANLLTG  AVNPSGHLPV  TWPVDESQLP  RPSIPGLGFK  PAKPGEDSID600
YAIEGANVGY  KWFAARKLTP  RYPFGHGLSY  TQFRMGGLQV  EARGSQLTAS  FEVENTGPRE660
GAAVPQLYVA  LPDGHATPLR  LIGWQKLTLK  PGEKRSVQVV  AEPKTLADFD  AKARRWTIAA720
GTYRVQLARS  TSEPVQTAEV  TLQAAQLP748

Predicted 3D structure by AlphaFold2 with pLDDT = 93.14 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(96-306)

MKPFTAHQNR  PRPLVLAVVM  GLGVAFAAPL  AVAQGAPSSQ  PWMDTALTPD  QRADRLLAQM60
SEDEKFQMLR  SYFGLGTDKI  PKPEGALGSA  GYVPGIPRLG  IPAQQLADAG  VGVTNPGGIR120
KGDYATAMPS  GPSTASSWNR  QLAYTGGKTM  GRESWQQGFN  VLLAGSVNLQ  RDPRNGRNFE180
YAGEDPLLAG  TMVGESIRGV  QSEHVLSTMK  HFALNDMETR  RNFHSAQIGE  QAMHESDLLA240
FEIALKIGDP  ASVMCSYNKI  NGIYGCEHDY  LLNQVLKQEW  KYPGYVMSDW  GGVHSGSKAA300
LAGLDQQSAG  EVFDAAVFFD  APLRMAVSAG  VVPRARFDDM  VKRVLRSLFA  HGAFDHPTQR360
QPIDGKAGLL  AAQRVAEEGS  VLLRNEQAAL  PLSKDVRRIA  VIGGYADKGV  MSGGGSSRVD420
YTINGGNAVP  GITPTTWPGP  VIIHPSSPLQ  ALRAALPNVQ  IDYLDGTDRA  AAARAAKAAD480
VAIVFATQWA  AESVDLPDMR  LPDNQDALIE  TVAKANPKTT  VVLETNGPVR  MPWAERVPAV540
LQAWYPGIGG  GEAIANLLTG  AVNPSGHLPV  TWPVDESQLP  RPSIPGLGFK  PAKPGEDSID600
YAIEGANVGY  KWFAARKLTP  RYPFGHGLSY  TQFRMGGLQV  EARGSQLTAS  FEVENTGPRE660
GAAVPQLYVA  LPDGHATPLR  LIGWQKLTLK  PGEKRSVQVV  AEPKTLADFD  AKARRWTIAA720
GTYRVQLARS  TSEPVQTAEV  TLQAAQLP748

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help