CAZyme3D

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Entry ID

Information for CAZyme ID: AAM29494.1

Basic Information

GenBank IDAAM29494.1
FamilyGH27
Sequence Length427
UniProt IDQ8MYY3(100,100)Download
Average pLDDT?93.49
CAZy50 ID5358
CAZy50 RepNo, CAD7241647.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID7227
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderDiptera
FamilyDrosophilidae
GenusDrosophila
SpeciesDrosophila melanogaster

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLATLWIILL  SSTFGKCLDN  GLAKTPPMGW  LSWERFRCNT  DCVNDPDNCI  SEQLFQTMTD60
IVVADGYASV  GYEYINIDDC  WLEKHRSHDG  KLVADRKRFP  NGIKALSDYI  HSRGLKFGIY120
EDYGNYTCAG  YPGIIGYEEK  DALQFADWNV  DYVKLDGCYA  LPYDMDHGYS  TFGRLLNSTG180
KSMVYSCSWP  VYQIYAGIQP  NYSAIQTHCN  LWRNYDDIQD  SWASVENIID  YYGNNQDVIA240
PNAGPGHWND  PDMLIIGNFG  LSYEQAKTQF  AIWSILAAPL  LMSVDLRTIR  PQFKHILQNR300
KIIAVDQDPL  GIQGRRIYKH  KGIEIWSRPI  GPLYQNFYSY  AIAFVNRRTD  GTPSDISVTL360
KELGLINFSG  YRVEDLYENV  DYGVLYPNTK  IKVKVNPSGV  VMLKGEVQYP  VTCKCNMFVE420
IAYDNII427

Predicted 3D structure by AlphaFold2 with pLDDT = 93.49 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH27(131-382)

MLATLWIILL  SSTFGKCLDN  GLAKTPPMGW  LSWERFRCNT  DCVNDPDNCI  SEQLFQTMTD60
IVVADGYASV  GYEYINIDDC  WLEKHRSHDG  KLVADRKRFP  NGIKALSDYI  HSRGLKFGIY120
EDYGNYTCAG  YPGIIGYEEK  DALQFADWNV  DYVKLDGCYA  LPYDMDHGYS  TFGRLLNSTG180
KSMVYSCSWP  VYQIYAGIQP  NYSAIQTHCN  LWRNYDDIQD  SWASVENIID  YYGNNQDVIA240
PNAGPGHWND  PDMLIIGNFG  LSYEQAKTQF  AIWSILAAPL  LMSVDLRTIR  PQFKHILQNR300
KIIAVDQDPL  GIQGRRIYKH  KGIEIWSRPI  GPLYQNFYSY  AIAFVNRRTD  GTPSDISVTL360
KELGLINFSG  YRVEDLYENV  DYGVLYPNTK  IKVKVNPSGV  VMLKGEVQYP  VTCKCNMFVE420
IAYDNII427

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help