CAZyme3D

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Entry ID

Information for CAZyme ID: AAL28965.1

Basic Information

GenBank IDAAL28965.1
FamilyGT17
Sequence Length487
UniProt IDQ95RF3(100,100)Download
Average pLDDT?78.89
CAZy50 ID71603
CAZy50 RepNo, NP_723787.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID7227
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderDiptera
FamilyDrosophilidae
GenusDrosophila
SpeciesDrosophila melanogaster

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVRSTFLATY  NQTPVAGVGR  LAITKKLVLW  LVLVLQVGFI  GCIWLLQMSR  GQESQQRSAM60
DQLGGRVNFV  ASGEAPMEKM  ALVGGTHCPH  LQENVNRYDK  DFYQMKPERL  NESHLPDYNV120
PAYVDAEMGL  TPNLWCYREG  TINESQRLND  VDYLMAPPQC  RCESGWHGRD  CGQPEIIWRA180
LMTSNRASKR  GGSTPLQLVE  ASSSSLHRLF  YMLELGAWDH  LSLELLELQI  RALIEVVDYF240
LIYYVSNGSK  ERSLESMLGS  QTSYTLLRCS  SESNCTSSMA  YSHFRRQLWQ  QCGVQMQAQD300
LLLHGDSGTV  YAPAALKFLK  YYAKDVLPLK  FRLKYNVYGF  YWQHPKKTLL  NGVISSLGHL360
HSAQLDAHRL  HRLASSTLGD  LNHYGGWNCE  LCLPPEQIVL  LLQSSSPRKL  PVKLPNDTRN420
AHIDANYMQQ  LIANGVHIDG  TTQLHRLREQ  SEKYFAPEEA  LQHSSQYGQL  LVNLYDVDVL480
EDLQDED487

Predicted 3D structure by AlphaFold2 with pLDDT = 78.89 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT17(285-471)

MVRSTFLATY  NQTPVAGVGR  LAITKKLVLW  LVLVLQVGFI  GCIWLLQMSR  GQESQQRSAM60
DQLGGRVNFV  ASGEAPMEKM  ALVGGTHCPH  LQENVNRYDK  DFYQMKPERL  NESHLPDYNV120
PAYVDAEMGL  TPNLWCYREG  TINESQRLND  VDYLMAPPQC  RCESGWHGRD  CGQPEIIWRA180
LMTSNRASKR  GGSTPLQLVE  ASSSSLHRLF  YMLELGAWDH  LSLELLELQI  RALIEVVDYF240
LIYYVSNGSK  ERSLESMLGS  QTSYTLLRCS  SESNCTSSMA  YSHFRRQLWQ  QCGVQMQAQD300
LLLHGDSGTV  YAPAALKFLK  YYAKDVLPLK  FRLKYNVYGF  YWQHPKKTLL  NGVISSLGHL360
HSAQLDAHRL  HRLASSTLGD  LNHYGGWNCE  LCLPPEQIVL  LLQSSSPRKL  PVKLPNDTRN420
AHIDANYMQQ  LIANGVHIDG  TTQLHRLREQ  SEKYFAPEEA  LQHSSQYGQL  LVNLYDVDVL480
EDLQDED487

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help