CAZyme3D

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Entry ID

Information for CAZyme ID: AAH94398.1

Basic Information

GenBank IDAAH94398.1
FamilyGT47, GT64
Sequence Length738
UniProt IDQ52KD9(100,100)Download
Average pLDDT?83.83
CAZy50 ID28804
CAZy50 RepNo, AWP20339.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID8355
KingdomEukaryota
PhylumChordata
ClassAmphibia
OrderAnura
FamilyPipidae
GenusXenopus
SpeciesXenopus laevis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MQAKKRYFTL  LSAGVCLALL  CYLGGVHLRA  AARSKRSGDG  IYRSPAQPWP  LLPDTSLLPF60
TQEEGGDPGS  QVSPRQKRDG  NSSIYKGKRC  RMESCFDLSL  CRRNGFKVYI  YPQQKGDKLS120
DSYQHILAAI  ETSRFYTSDP  SQACVFVLSL  DTLDRDQLSP  HYVHNLKSKV  QNLHLWNNGR180
NHLIFNLYSG  TWPDYTEDVG  FDIGQAMLAK  ASISTENFRP  NFDVSIPLFS  KDHPRTGGDK240
GFLRFNNIPP  MRKYMLVFKG  KRYLTGIGSD  TRNALYHVHN  GEDVVLLTTC  KHGKDWQKHK300
DARCDKDNAE  YEKYDYREML  HNATFCLVPR  GRRLGSFRFL  EALQAACVPV  MLSNGWELPF360
SEVIDWNQAA  VIGDERLLLQ  IPSTIRSIHQ  DKILALRQQT  QFLWEAYFSS  VEKIVLTTLE420
IIQDRIFKHI  SRNSLMWNKH  PGGLFALPQY  SAYLGDFPYY  YSNLGAKPPS  KFTAVIHAVT480
PLVSQSQPIL  KLLVAVAKSQ  YCYQIIVLWN  CDKPLPAKHR  WPATTVPVIV  IEGESKVMSS540
RFLPYDNIVT  DAVLSLDEDT  VLSTTEVDFA  FTVWQSFPER  IVGYPARSHF  WDSTRERWGY600
TSKWTNDYSM  VLTGAAIYHK  YYHYLYTNYL  PASLKNMVDQ  LANCEDILMN  FLVSAVTKLP660
PIKVTQKKQY  KETMMGQTSR  ASRWADPDHF  AQRQTCMNTF  ASWFGYMPLL  HSQMRLDPVL720
FKDQVSILRK  KYRDIERL738

Predicted 3D structure by AlphaFold2 with pLDDT = 83.83 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT47(104-388)+GT64(472-721)

MQAKKRYFTL  LSAGVCLALL  CYLGGVHLRA  AARSKRSGDG  IYRSPAQPWP  LLPDTSLLPF60
TQEEGGDPGS  QVSPRQKRDG  NSSIYKGKRC  RMESCFDLSL  CRRNGFKVYI  YPQQKGDKLS120
DSYQHILAAI  ETSRFYTSDP  SQACVFVLSL  DTLDRDQLSP  HYVHNLKSKV  QNLHLWNNGR180
NHLIFNLYSG  TWPDYTEDVG  FDIGQAMLAK  ASISTENFRP  NFDVSIPLFS  KDHPRTGGDK240
GFLRFNNIPP  MRKYMLVFKG  KRYLTGIGSD  TRNALYHVHN  GEDVVLLTTC  KHGKDWQKHK300
DARCDKDNAE  YEKYDYREML  HNATFCLVPR  GRRLGSFRFL  EALQAACVPV  MLSNGWELPF360
SEVIDWNQAA  VIGDERLLLQ  IPSTIRSIHQ  DKILALRQQT  QFLWEAYFSS  VEKIVLTTLE420
IIQDRIFKHI  SRNSLMWNKH  PGGLFALPQY  SAYLGDFPYY  YSNLGAKPPS  KFTAVIHAVT480
PLVSQSQPIL  KLLVAVAKSQ  YCYQIIVLWN  CDKPLPAKHR  WPATTVPVIV  IEGESKVMSS540
RFLPYDNIVT  DAVLSLDEDT  VLSTTEVDFA  FTVWQSFPER  IVGYPARSHF  WDSTRERWGY600
TSKWTNDYSM  VLTGAAIYHK  YYHYLYTNYL  PASLKNMVDQ  LANCEDILMN  FLVSAVTKLP660
PIKVTQKKQY  KETMMGQTSR  ASRWADPDHF  AQRQTCMNTF  ASWFGYMPLL  HSQMRLDPVL720
FKDQVSILRK  KYRDIERL738

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help