Information for CAZyme ID: AAH88475.1
Basic Information
| GenBank ID | AAH88475.1 |
| Family | GT58 |
| Sequence Length | 382 |
| UniProt ID | Q5M7T0(100,100) |
| Average pLDDT? | 81.73 |
| CAZy50 ID | 79062 |
| CAZy50 Rep | No, AWP04161.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 10116 |
| Kingdom | Eukaryota |
| Phylum | Chordata |
| Class | Mammalia |
| Order | Rodentia |
| Family | Muridae |
| Genus | Rattus |
| Species | Rattus norvegicus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MATAGLARTL STAAGASLHL DGGLLPLPSR GGHHLLGHSQ GGIYPAGFLY IFTGLYYATD | 60 |
| RGTDIPTAQN IFAVLYLVTL VLVFLIYHQT SKVPPFVFFF MCCASYRVHS IFVLRLFNDP | 120 |
| VAMALLFLSV NLFLAQRWSW GCCCFSLAVS VKMNVLLFAP GLLFLLLTQF GFRGALPKLA | 180 |
| LCAALQVVLG LPFLLENPVG YLSRSFDLGR QFLYQWTVNW RLLPEAIFLH RAFHLALLAA | 240 |
| HLSFLLLFAL CRWHRTGESI LSLLKDPSKR KVPPQPLTPN QIVSVLFTSN FIGVCFSRSL | 300 |
| HSQFYVWYFH TLPHLLWATP ARWLTHLLRL LVLGLIELSW NTYPSTPFSS AALHLCHAVT | 360 |
| LLQLWLSPQF FPRSVQPSRK TH | 382 |
Predicted 3D structure by AlphaFold2 with pLDDT = 81.73 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT58(35-350)
| MATAGLARTL STAAGASLHL DGGLLPLPSR GGHHLLGHSQ GGIYPAGFLY IFTGLYYATD | 60 |
| RGTDIPTAQN IFAVLYLVTL VLVFLIYHQT SKVPPFVFFF MCCASYRVHS IFVLRLFNDP | 120 |
| VAMALLFLSV NLFLAQRWSW GCCCFSLAVS VKMNVLLFAP GLLFLLLTQF GFRGALPKLA | 180 |
| LCAALQVVLG LPFLLENPVG YLSRSFDLGR QFLYQWTVNW RLLPEAIFLH RAFHLALLAA | 240 |
| HLSFLLLFAL CRWHRTGESI LSLLKDPSKR KVPPQPLTPN QIVSVLFTSN FIGVCFSRSL | 300 |
| HSQFYVWYFH TLPHLLWATP ARWLTHLLRL LVLGLIELSW NTYPSTPFSS AALHLCHAVT | 360 |
| LLQLWLSPQF FPRSVQPSRK TH | 382 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.