CAZyme3D

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Entry ID

Information for CAZyme ID: AAH72294.1

Basic Information

GenBank IDAAH72294.1
FamilyGT14
Sequence Length400
UniProt IDQ6INI6(100,100)Download
Average pLDDT?90.12
CAZy50 ID97587
CAZy50 RepNo, AAR95648.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID8355
KingdomEukaryota
PhylumChordata
ClassAmphibia
OrderAnura
FamilyPipidae
GenusXenopus
SpeciesXenopus laevis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMTSWVRCIF  PIPVLSVTVL  LLYYNSSLLK  FAGLHRYNIT  EEKLLLAETC  ESFINGQRSF60
ASESTLQTAF  EQSSCPEYVR  QNHFIMSPLS  EEEAAFPLAY  IITMHKEFDT  FERLFRAVYM120
PQNIYCIHVD  EKATADFMQA  VGSLVQCFPN  AFLASRMEPV  VYGGISRLQA  DLNCMKDLVA180
SDVQWKYVIN  MCGQDFPLKT  NKEIIYHIKS  FKGKNITPGV  LPPAHAIPRT  KYVHREDIVN240
SRVIRTNVVK  PPPPHNITIY  FGSAYIALTR  EFAQFILEDQ  RAIDLLLWSK  DTYSPDEHYW300
VTLNRIPDVP  GSAPNASWEG  NLRAVKWKDM  KNQEGCHGHY  VRDICIYGTG  DLPWLMNSRS360
VFANKFEVKS  YPPTVECLDL  KIRERTLNQS  QITVPPEWFL  400

Predicted 3D structure by AlphaFold2 with pLDDT = 90.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT14(98-347)

MMTSWVRCIF  PIPVLSVTVL  LLYYNSSLLK  FAGLHRYNIT  EEKLLLAETC  ESFINGQRSF60
ASESTLQTAF  EQSSCPEYVR  QNHFIMSPLS  EEEAAFPLAY  IITMHKEFDT  FERLFRAVYM120
PQNIYCIHVD  EKATADFMQA  VGSLVQCFPN  AFLASRMEPV  VYGGISRLQA  DLNCMKDLVA180
SDVQWKYVIN  MCGQDFPLKT  NKEIIYHIKS  FKGKNITPGV  LPPAHAIPRT  KYVHREDIVN240
SRVIRTNVVK  PPPPHNITIY  FGSAYIALTR  EFAQFILEDQ  RAIDLLLWSK  DTYSPDEHYW300
VTLNRIPDVP  GSAPNASWEG  NLRAVKWKDM  KNQEGCHGHY  VRDICIYGTG  DLPWLMNSRS360
VFANKFEVKS  YPPTVECLDL  KIRERTLNQS  QITVPPEWFL  400

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help