CAZyme3D

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Entry ID

Information for CAZyme ID: AAH35672.1

Basic Information

GenBank IDAAH35672.1
FamilyGT25
Sequence Length626
UniProt IDQ8IYK4(100,100)Download
Average pLDDT?88.26
CAZy50 ID4918
CAZy50 RepNo, AWP05996.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID9606
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderPrimates
FamilyHominidae
GenusHomo
SpeciesHomo sapiens

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAARPAATLA  WSLLLLSSAL  LREGCRARFV  AERDSEDDGE  EPVVFPESPL  QSPTVLVAVL60
ARNAAHTLPH  FLGCLERLDY  PKSRMAIWAA  TDHNVDNTTE  IFREWLKNVQ  RLYHYVEWRP120
MDEPESYPDE  IGPKHWPTSR  FAHVMKLRQA  ALRTAREKWS  DYILFIDVDN  FLTNPQTLNL180
LIAENKTIVA  PMLESRGLYS  NFWCGITPKG  FYKRTPDYVQ  IREWKRTGCF  PVPMVHSTFL240
IDLRKEASDK  LTFYPPHQDY  TWTFDDIIVF  AFSSRQAGIQ  MYLCNREHYG  YLPIPLKPHQ300
TLQEDIENLI  HVQIEAMIDR  PPMEPSQYVS  VVPKYPDKMG  FDEIFMINLK  RRKDRRDRML360
RTLYEQEIEV  KIVEAVDGKA  LNTSQLKALN  IEMLPGYRDP  YSSRPLTRGE  IGCFLSHYSV420
WKEVIDRELE  KTLVIEDDVR  FEHQFKKKLM  KLMDNIDQAQ  LDWELIYIGR  KRMQVKEPEK480
AVPNVANLVE  ADYSYWTLGY  VISLEGAQKL  VGANPFGKML  PVDEFLPVMY  NKHPVAEYKE540
YYESRDLKAF  SAEPLLIYPT  HYTGQPGYLS  DTETSTIWDN  ETVATDWDRT  HAWKSRKQSR600
IYSNAKNTEA  LPPPTSLDTV  PSRDEL626

Predicted 3D structure by AlphaFold2 with pLDDT = 88.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(62-180)+GT25(342-525)

MAARPAATLA  WSLLLLSSAL  LREGCRARFV  AERDSEDDGE  EPVVFPESPL  QSPTVLVAVL60
ARNAAHTLPH  FLGCLERLDY  PKSRMAIWAA  TDHNVDNTTE  IFREWLKNVQ  RLYHYVEWRP120
MDEPESYPDE  IGPKHWPTSR  FAHVMKLRQA  ALRTAREKWS  DYILFIDVDN  FLTNPQTLNL180
LIAENKTIVA  PMLESRGLYS  NFWCGITPKG  FYKRTPDYVQ  IREWKRTGCF  PVPMVHSTFL240
IDLRKEASDK  LTFYPPHQDY  TWTFDDIIVF  AFSSRQAGIQ  MYLCNREHYG  YLPIPLKPHQ300
TLQEDIENLI  HVQIEAMIDR  PPMEPSQYVS  VVPKYPDKMG  FDEIFMINLK  RRKDRRDRML360
RTLYEQEIEV  KIVEAVDGKA  LNTSQLKALN  IEMLPGYRDP  YSSRPLTRGE  IGCFLSHYSV420
WKEVIDRELE  KTLVIEDDVR  FEHQFKKKLM  KLMDNIDQAQ  LDWELIYIGR  KRMQVKEPEK480
AVPNVANLVE  ADYSYWTLGY  VISLEGAQKL  VGANPFGKML  PVDEFLPVMY  NKHPVAEYKE540
YYESRDLKAF  SAEPLLIYPT  HYTGQPGYLS  DTETSTIWDN  ETVATDWDRT  HAWKSRKQSR600
IYSNAKNTEA  LPPPTSLDTV  PSRDEL626

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help