CAZyme3D

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Entry ID

Information for CAZyme ID: AAF53537.1

Basic Information

GenBank IDAAF53537.1
FamilyGH18
Sequence Length441
UniProt IDQ8MLZ7(100,100)Download
Average pLDDT?91.39
CAZy50 ID26209
CAZy50 RepNo, UWY63829.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID7227
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderDiptera
FamilyDrosophilidae
GenusDrosophila
SpeciesDrosophila melanogaster

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTGSLWLSLA  LSLAVLAQFK  VSAAPNLVCF  YDSQGSQRQG  LAQFSMIDIE  LALQFCTHLV60
YGYAGVNADN  YEMQSINKRL  DLEQRHLAQI  TSMKERYPHI  KFLLSVGGDA  DTYEGNQYIK120
LLESGQQGHR  RFIESARDLV  RRYNFDGLDL  ALQLPRNKPR  KVHGDVGSAW  KSFKKFFTGD180
FIVDTESETH  KGQVTALIKD  LSAALKQNDL  LLSLTVLPNV  NSSWYYDAPS  IAPSLDFINL240
GTFDFLTPQR  NPEEADFSAP  TYEAVGQNRL  GHYNLNFQME  HWLLQRVPAN  KINIGIATYG300
RSWKMSKDSG  DSGMPVVPST  QGPAPAGPQS  KQEGLLNWAE  ICSLMPNPSN  SNARGPNAPV360
KRVVDPTKRY  GSYAFRAADE  NGDHGLWISY  DDPDSASSKA  MYARARNLGG  VALFDLTQDD420
FRGQCTNDRF  PMLRAIKYRL  L441

Predicted 3D structure by AlphaFold2 with pLDDT = 91.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(26-424)

MTGSLWLSLA  LSLAVLAQFK  VSAAPNLVCF  YDSQGSQRQG  LAQFSMIDIE  LALQFCTHLV60
YGYAGVNADN  YEMQSINKRL  DLEQRHLAQI  TSMKERYPHI  KFLLSVGGDA  DTNEGNQYIK120
LLESGQQGHR  RFIESARDLV  RRYNFDGLDL  ALQLPRNKPR  KVHGDVGSAW  KSFKKFFTGD180
FIVDTESETH  KGQVTALIKD  LSAALKQNDL  LLSLTVLPNV  NSSWYYDAPS  IAPSLDFINL240
GTFDFLTPQR  NPEEADFSAP  TYEAVGQNRL  GHYNLNFQME  HWLLQRVPAN  KINIGIATYG300
RSWKMSKDSG  DSGMPVVPST  QGPAPAGPQS  KQEGLLNWAE  ICSLMPNPSN  SNARGPNAPV360
KRVVDPTKRY  GSYAFRAADE  NGDHGLWISY  DDPDSASSKA  MYARARNLGG  VALFDLTQDD420
FRGQCTNDRF  PMLRAIKYRL  L441

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help