CAZyme3D

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Entry ID

Information for CAZyme ID: AAF38696.1

Basic Information

GenBank IDAAF38696.1
FamilyGT5
Sequence Length476
UniProt IDQ9Z6V8(100,100)Download
Average pLDDT?93.27
CAZy50 ID70304
CAZy50 RepNo, ADI51472.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID115711
KingdomBacteria
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia pneumoniae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRIVQVAVEF  TPIVKVGGLG  DAVASLSKEL  AKQNDVEVLL  PHYPLISKFS  SSQVLSERSF60
YYEFLGKQQA  SAISYSYEGL  TLTIITLDSQ  IELFSTTSVY  SENNVVRFSA  FAAAAAAYLQ120
EADPADIVHL  HDWHVGLLAG  LLKNPLNPVH  SKIVFTIHNF  GYRGYCSTQL  LAASQIDDFH180
LSHYQLFRDP  QTSVLMKGAL  YCSDYITTVS  LTYVQEIIND  YSDYELHDAI  LARNSVFSGI240
INGIDEDVWN  PKTDPALAVQ  YDASLLSEPD  VLFTKKEENR  AVLYEKLGIS  SDYFPLICVI300
SRIVEEKGPE  FMKEIILHAM  EHSYAFILIG  TSQNEVLLNE  FRNLQDCLAS  SPNIRLILDF360
NDPLARLTYA  AADMICIPSH  REACGLTQLI  AMRYGTVPLV  RKTGGLADTV  IPGVNGFTFF420
DTNNFNEFRA  MLSNAVTTYR  QEPDVWLNLI  ESGMLRASGL  DAMAKHYVNL  YQSLLS476

Predicted 3D structure by AlphaFold2 with pLDDT = 93.27 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT5(2-472)

MRIVQVAVEF  TPIVKVGGLG  DAVASLSKEL  AKQNDVEVLL  PHYPLISKFS  SSQVLSERSF60
YYEFLGKQQA  SAISYSYEGL  TLTIITLDSQ  IELFSTTSVY  SENNVVRFSA  FAAAAAAYLQ120
EADPADIVHL  HDWHVGLLAG  LLKNPLNPVH  SKIVFTIHNF  GYRGYCSTQL  LAASQIDDFH180
LSHYQLFRDP  QTSVLMKGAL  YCSDYITTVS  LTYVQEIIND  YSDYELHDAI  LARNSVFSGI240
INGIDEDVWN  PKTDPALAVQ  YDASLLSEPD  VLFTKKEENR  AVLYEKLGIS  SDYFPLICVI300
SRIVEEKGPE  FMKEIILHAM  EHSYAFILIG  TSQNEVLLNE  FRNLQDCLAS  SPNIRLILDF360
NDPLARLTYA  AADMICIPSH  REACGLTQLI  AMRYGTVPLV  RKTGGLADTV  IPGVNGFTFF420
DTNNFNEFRA  MLSNAVTTYR  QEPDVWLNLI  ESGMLRASGL  DAMAKHYVNL  YQSLLS476

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help