CAZyme3D

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Entry ID

Information for CAZyme ID: AAF26093.1

Basic Information

GenBank IDAAF26093.1
FamilyCE13
Sequence Length371
UniProt IDQ9SFF6(100,100)Download
Average pLDDT?90.67
CAZy50 ID17964
CAZy50 RepNo, VDC92697.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID3702
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderBrassicales
FamilyBrassicaceae
GenusArabidopsis
SpeciesArabidopsis thaliana
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/Q9SFF6.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVKLLLVGFV  VAGIILGTQA  NEYLDFNVTE  IDRIEELEFG  FSKYSSNLNP  LMVGLTLIRG60
ADSGAVCLDG  TLPGYHLHRG  HGSGANSWLI  QLEGGGWCNN  IRTCVYRKTT  RRGSSNYMEK120
QLQFTGILSD  KAQENPDFFN  WNRVKLRYCD  GASFSGDGQN  QAAQLQFRGE  RIWRAAIDDL180
KANGMRYANQ  ALLSGCSAGG  LAAILRCDEF  RNLFPGSTKV  KCLSDAGLFL  DTADVSGGRT240
IRNLYNGVVE  LQIQSSIAPT  SADPSGFWHD  CRLNHGKCTP  AQLRFLQGFR  EQMLRVVKGF300
SMSRQNGLFI  NSCFAHCQTE  RQDTWFADDS  PVIRKKAVAI  AVGDWYFDRA  EVKLVDCPYP360
CDKSCHNLVF  R371

Predicted 3D structure by AlphaFold2 with pLDDT = 90.67 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE13(51-252)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help