CAZyme3D

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Entry ID

Information for CAZyme ID: AAD15452.2

Basic Information

GenBank IDAAD15452.2
FamilyGT77
Sequence Length528
UniProt IDQ8VXZ5(100,100)Download
Average pLDDT?86.78
CAZy50 ID3162
CAZy50 RepNo, QHO40204.1
Structure Cluster-
EC Number(s)2.4.2.-
Substrates(s)-

Taxonomy

Tax ID3702
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderBrassicales
FamilyBrassicaceae
GenusArabidopsis
SpeciesArabidopsis thaliana

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPPLETFKLT  KELFGERVKD  NVIIVTFGNY  AFMDFILTWV  KHLTDLDLSN  ILVGAMDTKL60
LEALYWKGVP  VFDMGSHMST  VDVGWGSPTF  HKMGREKVIL  IDSVLPFGYE  LLMCDTDMNP120
MPYLARFPDA  DVLTSSDQVV  PTVIDDSLDI  WQQVGAAYNI  GIFHWRPTES  AKKLAKEWKE180
ILLADDKVWD  QNGFNEIVRR  QLGPSVEGDS  GLFYAYDGNL  KVGILPASIF  CSGHTYFVQA240
MYQQLRLEPY  AVHTTFQYAG  TEGKRHRLRE  GMVFYDPPEY  YDSPGGFIAF  KPSIPKSLLL300
DGKHTIESHF  ILVNHQMKQI  RSALAIASLL  NRTLVMPPIW  CRLDRLWFGH  PGTLQGSMTR360
QPFICPLDHV  FEVNIMLKEL  PEEEFGPGIG  IREYSFLDNP  LLPKQVKESW  LDVQLCQEGK420
EGCEASNNTS  PSRVLKFPKR  SNEDTFKAIF  SSFDDVKVIK  FSSIEDAFIG  FSDKAKERFR480
RRVKRYVGIW  CCEENKTPGH  IYYDMYWDEK  PGWKPVPPQT  PEEDHPPL528

Predicted 3D structure by AlphaFold2 with pLDDT = 86.78 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT77(48-268)

MVEGWRNGFR  DATNSKPLFV  TIYATVIIGV  LVSSFYVFSA  IYSPTNGSSS  FLSFPPLSTS60
GRIHSLPQEN  ATLELPVAPP  PPPQALPPPV  LEEAQGNSLG  KIWVSPPRDK  KMPPLETFKL120
TKELFGERVK  DNVIIVTFGN  YAFMDFILTW  VKHLTDLDLS  NILVGAMDTK  LLEALYWKGV180
PVFDMGSHMS  TVDVGWGSPT  FHKMGREKVI  LIDSVLPFGY  ELLMCDTDMV  WLKNPMPYLA240
RFPDADVLTS  SDQVVPTVID  DSLDIWQQVG  AAYNIGIFHW  RPTESAKKLA  KEWKEILLAD300
DKVWDQNGFN  EIVRRQLGPS  VEGDSGLFYA  YDGNLKVGIL  PASIFCSGHT  YFVQAMYQQL360
RLEPYAVHTT  FQYAGTEGKR  HRLREGMVFY  DPPEYYDSPG  GFIAFKPSIP  KSLLLDGKHT420
IESHFILVNH  QMKQIRSALA  IASLLNRTLV  MPPIWCRLDR  LWFGHPGTLQ  GSMTRQPFIC480
PLDHVFEVNI  MLKELPEEEF  GPGIGIREYS  FLDNPLLPKQ  VKESWLDVQL  CQEGKEGCEA540
SNNTSPSRVL  KFPKRSNEDT  FKAIFSSFDD  VKVIKFSSIE  DAFIGFSDKE  REERFRRRVK600
RYVGIWCCEE  NKTPGHIYYD  MYWDEKPGWK  PVPPQTPEED  HPPL644

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help