Information for CAZyme ID: AAB70917.1
Basic Information
| GenBank ID | AAB70917.1 |
| Family | CBM12, GH18 |
| Sequence Length | 700 |
| UniProt ID | O30678(100,100) |
| Average pLDDT? | 88.27 |
| CAZy50 ID | 23152 |
| CAZy50 Rep | No, QDH69304.1 |
| Structure Cluster | - |
| EC Number(s) | 3.2.1.14 |
| Substrates(s) | chitin |
Taxonomy
| Tax ID | 40324 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Xanthomonadales |
| Family | Xanthomonadaceae |
| Genus | Stenotrophomonas |
| Species | Stenotrophomonas maltophilia |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPDPMMRSAV TSISLQPAAR HKRWLLALAL AAAATPSLAL AANCTGAPEW NAAVIYLSGT | 60 |
| TLQKGGVLYR ANQDIWNAPP DHPAGAPYYT NLGACDGSGS NQPPTVSLTA PTAGASFTAG | 120 |
| SSITVSANAA DSDGSVSKVE FFRGGTSLGI DTSAPYSVTW ANASAGSHTF KAVATDNNNA | 180 |
| VTSSATVSVT VTASSNDTTP PSVPGGLASP SKTATTVNLV WSAATDNSGG SGVAGYDVYR | 240 |
| NGSLVGSPSA TQYTDGGLTA STAYTYTVRA RDNAGNASAQ SGSISVTTAA GGGGGGTKRV | 300 |
| IGYFTQWGIY GRNYRVKNID TSGSAAKLTH INYAFGNVRN NRCEVGVTQA SDPNTGVGGD | 360 |
| AFADYTKAFG AGESVSGSAD TWDQPLRGNW NQLKQLKAKH PNVKVLISLG GWTWSRGFSS | 420 |
| AAQPANRQAF VASCVDAYIK GNLPVTDGAG GVGAAAGVFD GIDIDWEYPV ACGLSCGTPA | 480 |
| DNANYTALLA EFRRQLDAVR PGLLLTVAVG AGIDKIRVTD PAAYHPYLDF INVMTYDFHG | 540 |
| AWDPQTNHHS ALFDSPADPS TGDQKLYNSN DAMEAFLSRG VPASKLNLGI GYYGRGWTGV | 600 |
| ASGNNGLYKS AGGAAPGTYE AGIEDWKVLK NLNWPVYTDT VAKATWISNG TTFWSVDTPA | 660 |
| MVTEKMGYVK AQGLGGAFFW EFSGDDPQGT LTKAISDGLN | 700 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.27 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM12(48-80)+GH18(297-690)
| MPDPMMRSAV TSISLQPAAR HKRWLLALAL AAAATPSLAL AANCTGAPEW NAAVIYLSGT | 60 |
| TLQKGGVLYR ANQDIWNAPP DHPAGAPYYT NLGACDGSGS NQPPTVSLTA PTAGASFTAG | 120 |
| SSITVSANAA DSDGSVSKVE FFRGGTSLGI DTSAPYSVTW ANASAGSHTF KAVATDNNNA | 180 |
| VTSSATVSVT VTASSNDTTP PSVPGGLASP SKTATTVNLV WSAATDNSGG SGVAGYDVYR | 240 |
| NGSLVGSPSA TQYTDGGLTA STAYTYTVRA RDNAGNASAQ SGSISVTTAA GGGGGGTKRV | 300 |
| IGYFTQWGIY GRNYRVKNID TSGSAAKLTH INYAFGNVRN NRCEVGVTQA SDPNTGVGGD | 360 |
| AFADYTKAFG AGESVSGSAD TWDQPLRGNW NQLKQLKAKH PNVKVLISLG GWTWSRGFSS | 420 |
| AAQPANRQAF VASCVDAYIK GNLPVTDGAG GVGAAAGVFD GIDIDWEYPV ACGLSCGTPA | 480 |
| DNANYTALLA EFRRQLDAVR PGLLLTVAVG AGIDKIRVTD PAAYHPYLDF INVMTYDFHG | 540 |
| AWDPQTNHHS ALFDSPADPS TGDQKLYNSN DAMEAFLSRG VPASKLNLGI GYYGRGWTGV | 600 |
| ASGNNGLYKS AGGAAPGTYE AGIEDWKVLK NLNWPVYTDT VAKATWISNG TTFWSVDTPA | 660 |
| MVTEKMGYVK AQGLGGAFFW EFSGDDPQGT LTKAISDGLN | 700 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.