Information for CAZyme ID: AAB23374.1
Basic Information
| GenBank ID | AAB23374.1 |
| Family | CBM18, GH19 |
| Sequence Length | 328 |
| UniProt ID | P08252(100,100) |
| Average pLDDT? | 88.80 |
| CAZy50 ID | 48744 |
| CAZy50 Rep | No, ACS04172.1 |
| Structure Cluster | - |
| EC Number(s) | 3.2.1.14 |
| Substrates(s) | chitin |
Taxonomy
| Tax ID | 4097 |
| Kingdom | Eukaryota |
| Phylum | Streptophyta |
| Class | Magnoliopsida |
| Order | Solanales |
| Family | Solanaceae |
| Genus | Nicotiana |
| Species | Nicotiana tabacum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRLCKFTALS SLLFSLLLLS ASAEQCGSQA GGARCPSGLC CSKFGWCGNT NDYCGPGNCQ | 60 |
| SQCPGGPTPT PPHPTRCDLG SIISSSMFDQ MLKHRNDNAC QGKGFYSYNA FINAARSFPG | 120 |
| FGTSGDTTAR KREIAAFFAQ TSHETTGGWA TAPDGPYAWG YCWLREQGSP GDYCTPSGQW | 180 |
| PCAPGRKYFG RGPIQISHNY NYGPCGRAIG VDLLNNPDLV ATDPVISFKS ALWFWMTPQS | 240 |
| PKPSCHDVII GRWQPSAGDR ASNRLPGFGV ITNIINGGLE CGRGTDSRVQ DRIGFYRRYC | 300 |
| SILGVSPGDN LDCGNQRSFG NGLLVDTM | 328 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.80 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM18(25-63)+GH19(81-313)
| MRLCKFTALS SLLFSLLLLS ASAEQCGSQA GGARCPSGLC CSKFGWCGNT NDYCGPGNCQ | 60 |
| SQCPGGPTPT PPTPPGGGDL GSIISSSMFD QMLKHRNDNA CQGKGFYSYN AFINAARSFP | 120 |
| GFGTSGDTTA RKREIAAFFA QTSHETTGGW ATAPDGPYAW GYCWLREQGS PGDYCTPSGQ | 180 |
| WPCAPGRKYF GRGPIQISHN YNYGPCGRAI GVDLLNNPDL VATDPVISFK SALWFWMTPQ | 240 |
| SPKPSCHDVI IGRWQPSAGD RAANRLPGFG VITNIINGGL ECGRGTDSRV QDRIGFYRRY | 300 |
| CSILGVSPGD NLDCGNQRSF GNGLLVDTM | 329 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.