CAZyme3D

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Entry ID

Information for CAZyme ID: AAA80568.1

Basic Information

GenBank IDAAA80568.1
FamilyPL1_7
Sequence Length326
UniProt IDQ00645(100,100)Download
Average pLDDT?95.36
CAZy50 ID140803
CAZy50 RepNo, CAW96173.1
Structure Cluster-
EC Number(s)4.2.2.2
Substrates(s)pectin

Taxonomy

Tax ID162425
KingdomEukaryota
PhylumAscomycota
ClassEurotiomycetes
OrderEurotiales
FamilyAspergillaceae
GenusAspergillus
SpeciesAspergillus nidulans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRFTPLFLLA  AVAIASPAPD  LNARHELTRR  QASESCPIGY  CTQNGGTTGG  AAGDTVTVTN60
LADLTEAAES  DGPLTIIVSG  SISGSAKIRV  ASDKTIFGES  GSSITGIGFY  IRRVSNVIMR120
NLKISKVDAD  NGDAIGIDAS  SNVWVDHCDL  SGDLSGGKDD  LDGLVDISHG  AEWITVSNTY180
FHDHWKGSLI  GHSDNNEDED  LGHLHVTYAN  NYWYNVYSRT  PLIRFATVHI  INNYWDSLID240
TGVNCRMDAQ  VLIQSSAFHN  CPDRAIFFAD  SDYTGYAVVD  DVDLGGSSNS  VPEGTLTPSS300
LPYAAITALG  SGQVASVIPG  TAGQKL326

Predicted 3D structure by AlphaFold2 with pLDDT = 95.36 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL1_7(77-258)

MRFTPLFLLA  AVAIASPAPD  LNARHELTRR  QASESCPIGY  CTQNGGTTGG  AAGDTVTVTN60
LADLTEAAES  DGPLTIIVSG  SISGSAKIRV  ASDKTIFGES  GSSITGIGFY  IRRVSNVIMR120
NLKISKVDAD  NGDAIGIDAS  SNVWVDHCDL  SGDLSGGKDD  LDGLVDISHG  AEWITVSNTY180
FHDHWKGSLI  GHSDNNEDED  LGHLHVTYAN  NYWYNVYSRT  PLIRFATVHI  INNYWDSLID240
TGVNCRMDAQ  VLIQSSAFHN  CPDRAIFFAD  SDYTGYAVVD  DVDLGGSSNS  VPEGTLTPSS300
LPYAAITALG  SGQVASVIPG  TAGQKL326

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help