CAZyme3D

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Entry ID

Information for CAZyme ID: AAA22298.1

Basic Information

GenBank IDAAA22298.1
FamilyCBM20, GH13_2
Sequence Length714
UniProt IDP04830(100,100)Download
Average pLDDT?96.22
CAZy50 ID34736
CAZy50 RepNo, CDZ24376.1
Structure Cluster-
EC Number(s)2.4.1.19
Substrates(s)alpha-glucan

Taxonomy

Tax ID44252
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus macerans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKSRYKRLTS  LALSLSMALG  ISLPAWASPD  TSVDNKVNFS  TDVIYQIVTD  RFADGDRTNN60
PAGDAFSGDR  SNLKLYFGGD  WQGIIDKIND  GYLTGMGVTA  LWISQPVENI  TSVIKYSGVN120
NTSYHGYWAR  DFKQTNDAFG  DFADFQNLID  TLTLITSRSD  RLRPQPHVSG  RAGTNPGFAE180
NGALYDNGSL  LGAYSNDTAG  LFHHNGGTDF  STIEDGIYKN  LYDLADINHN  NNAMDAYFKS240
AIDLWLGMGV  DGIRFDAVKQ  YPFGWQKSFV  SSIYGGDHPV  FTFGEWYLGA  DQTDGDNIKF300
ANESGMNLLD  FEYAQEVREV  FRDKTETMKD  LYEVLASTES  QYDYINNMVT  FIDNHDMDRF360
QVAGSGTRAT  EQALALTLTS  RGVPAIYYGT  EQYMTGDGDP  NNRAMMTSFN  TGTTAYKVIQ420
ALAPLRKSNP  AIAYGTTTER  WVNNDVLIIE  RKFGSSAALV  AINRNSSAAY  PISGLLSSLP480
AGTYSDVLNG  LLNGNSITVG  SGGAVTNFTL  AAGGTAVWQY  TAPETSPAIG  NVGPTMGQPG540
NIVTIDGRGF  GGTAGTVYFG  TTAVTGSGIV  SWEDTQIKAV  IPKVAAGKTG  VSVKTSSGTA600
SNTFKSFNVL  TGDQVTVRFL  VNQANTNYGT  NVYLVGNAAE  LGTWDPNKAI  GPMYNQVIAK660
YPSWYYDVSV  PAGTKLDFKF  IKKGGGTVTW  EGGGNHTYTT  PASGVGTVTV  DWQN714

Predicted 3D structure by AlphaFold2 with pLDDT = 96.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_2(78-394)+CBM20(615-704)

MKSRYKRLTS  LALSLSMALG  ISLPAWASPD  TSVDNKVNFS  TDVIYQIVTD  RFADGDRTNN60
PAGDAFSGDR  SNLKLYFGGD  WQGIIDKIND  GYLTGMGVTA  LWISQPVENI  TSVIKYSGVN120
NTSYHGYWAR  DFKQTNDAFG  DFADFQNLID  TAHAHNIKVV  IDFAPNHTSP  ADRDNPGFAE180
NGGMYDNGSL  LGAYSNDTAG  LFHHNGGTDF  STIEDGIYKN  LYDLADINHN  NNAMDAYFKS240
AIDLWLGMGV  DGIRFDAVKH  MPFGWQKSFV  SSIYGGDHPV  FTFGEWYLGA  DQTDGDNIKF300
ANESGMNLLD  FEYAQEVREV  FRDKTETMKD  LYEVLASTES  QYDYINNMVT  FIDNHDMDRF360
QVAGSGTRAT  EQALALTLTS  RGVPAIYYGT  EQYMTGDGDP  NNRAMMTSFN  TGTTAYKVIQ420
ALAPLRKSNP  AIAYGTTTER  WVNNDVLIIE  RKFGSSAALV  AINRNSSAAY  PISGLLSSLP480
AGTYSDVLNG  LLNGNSITVG  SGGAVTNFTL  AAGGTAVWQY  TAPETSPAIG  NVGPTMGQPG540
NIVTIDGRGF  GGTAGTVYFG  TTAVTGSGIV  SWEDTQIKAV  IPKVAAGKTG  VSVKTSSGTA600
SNTFKSFNVL  TGDQVTVRFL  VNQANTNYGT  NVYLVGNAAE  LGSWDPNKAI  GPMYNQVIAK660
YPSWYYDVSV  PAGTKLDFKF  IKKGGGTVTW  EGGGNHTYTT  PASGVGTVTV  DWQN714

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help