3D Structure for uvig_99788_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 95.82 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_99788_CDS_0002 1 AcrIIA7 0.93 View Alignment uvig_99788_CDS_0002 M D F G D V I K E M K S N P S K R F A R K G W N G K G I F I Q L Q V P D E C S K M T H P Y I Y I D -T T G L ----Q -(60)
M FG ++ K + ARKGWNGKG P++ S + L
AcrIIA7 M T F G Q A L E S L K R -G -H L V A R K G W N G K G -M F I F M R P E D -S -L P T N -M I V N Q V K S L P E S F K R
uvig_99788_CDS_0002 --S D -N P D ---A P R -D L V -------------P -W -L A S Q T D M L A D D W E E V T E (112)
D LASQTDMLA DW V E
AcrIIA7 W V A N N H G D S E T D R -I K F T A Y L C M K A A D G T I V N G -W L A S Q T D M L A N D W V I V -E
uvig_99788_CDS_0002 2 AcrIE9 0.83 View Alignment uvig_99788_CDS_0002 M D F G D V I K E M K -S N P S K R F A R K G W N G K G I F I Q L -Q V P D E C S K M T H P Y I Y I D T -T G L Q S D N (60)
M+ + + G + S G +
AcrIE9 M E M Q -I -N S R -K -L -G R T I T F S R P -G A S Y I F -A D L -N G -K S G T L G -C Q I C S -G G G T M G S T
uvig_99788_CDS_0002 P D -A P -R D L V P W L A S Q T -D M L A D D W E E V T E (90)
D E
AcrIE9 L S Y D -G -D D Q A Q F E A I C R R -W Y R A H V R G -E
uvig_99788_CDS_0002 3 AcrIIA4 0.81 View Alignment uvig_99788_CDS_0002 M D F G D V I K E M K S N P S K R F A R K G W -N -G K -G -I -F I Q L -Q V P D E C S K M T H P Y I Y I D T T G L Q (60)
M D+I+E K+ G + I + I +
AcrIIA4 M N I N D L I R E I K N K D Y T -V K L S G T D S N S I T -Q -L I I -R V N N ----D --G -N E Y V I S E S E N E
uvig_99788_CDS_0002 S ---D N P D A -P -R -D L V -P W L -A -S Q T D M L A D D -W E --E --V -T E (105)
S A + D
AcrIIA4 S I V E K F I S A F -K -N G W -N Q E -Y -E -D E E E F Y N D M Q T I T -L K S E L N
uvig_99788_CDS_0002 4 AcrIF19 0.79 View Alignment uvig_99788_CDS_0002 M -D F G D V I K E M K S N P S K R -F A R --K G W -N -G -K G I -F I Q L -Q V P D E C S K M T H P Y I Y I D T -(60)
M + + + + D D
AcrIF19 M K P -L H T M ---N Y D -N N Q M S L V Y E S Y D E Y G F E Y S -V K L K I S V -R D -Y R G ------I -D V S
uvig_99788_CDS_0002 -T G L ----Q S -D N P -----D ----A -P -R -D L V P W L A S Q T D M L A D D W E -E -V -T E (115)
+ + S D
AcrIF19 A F N A F P E W E -D T L R M R D R V -M S V E E I -E -N A M I S R Y K S L F I A P P D C --T -Y E F D I
uvig_99788_CDS_0002 5 AcrIC3 0.79 View Alignment uvig_99788_CDS_0002 M D F G D V I --K ----E ---M K S ----N P S K R F A R K G W N G K G I F I Q L Q V P D E C S K M -T -H -P (60)
M + + +G+ VP+
AcrIC3 M S I Q V T S T N G R T V N L E I E L G -S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A ----G -N -R -
uvig_99788_CDS_0002 -Y I Y I D T T G L -Q S D N P D A P R D L V P W L A S ---Q ---T -D M -L -A -D -D W -E -E V -T E (116)
+ T + +L+ + +
AcrIC3 R I E V A L T G R D L E -A A N A L F S E L A A S V E A T N E M Y R E L D A -E -R -A -Q -I N -K -A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;