3D Structure for uvig_96891_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.79 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_96891_CDS_0005 1 AcrIB1 0.81 View Alignment uvig_96891_CDS_0005 M E A K T L S S D I D I S I H K -L ----L -E E D L E Q V L S F S --C A N T V L D N F F H K E I F L C A K H H Y L (60)
ME K + E L + S + ++ F H + K
AcrIB1 M E S K ----N -L R K L L N E -Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S
uvig_96891_CDS_0005 A A Y C A K I V H T N E I V A I F T L A N D S I M I D D N E E K K D F I E E T C S K I S S E Y V S I F -E N Q T S Y P A (120)
Y + NEI+ FT+AN S+ I E + K+ + I
AcrIB1 S T Y V V F S -E D N E I L G Y F T I A N R S L V I P -K E N F G I L S K T Q Q K K L G -N S A A I L K N G D L M T S S
uvig_96891_CDS_0005 I N I G H L G V K E D F -Q -S K G I G Q K I I D F V I Y T F C N Y -N M S G C Q F I T V D S L N N K R T N K F Y S R N (180)
+G LG + G ++ F+ F I ++ N + FY+
AcrIB1 F L L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F
uvig_96891_CDS_0005 Y F Y N Q T N S D C T S A T R R M Y K P L Q I Y K D D S D -L E (212)
F + + M +
AcrIB1 G F K M L E S L T S E E G L K V M I M -------E --L -K
uvig_96891_CDS_0005 2 AcrVA5 0.61 View Alignment uvig_96891_CDS_0005 M E A K T L S S D I D I S I H K L L E E D L E Q V L S F S C A N T V L D N F F H K E I F L C A K H H Y L A A Y C A K I V (60)
M + L +
AcrVA5 M K I E -L --S G G Y I C Y S I -------------E -----------------------------
uvig_96891_CDS_0005 H T N E I V A I F T L A N D S I M I D D N E E K K D F I E E T C S K I S S E Y V S I F E N Q T S Y P A I N I G H L G V K (120)
++I + V
AcrVA5 --------------------------------------------E ----D E V T I D M V E V T
uvig_96891_CDS_0005 E D F Q S K G I G Q K I I D F V I Y T F C N Y N M S -G C Q F I T V D S --L ----N -N K R T N K F Y S R N Y F Y N (180)
GIG+ +ID V I + + FY N F
AcrVA5 -T -K R Q G I G S Q L I D M V K D V A R -E ---V -G L P I G L Y A Y P Q D D S I -S Q E D L I E F Y F S N D F E Y
uvig_96891_CDS_0005 Q T N S D C T S A T R R M Y K P L Q I Y K D D S D L E (207)
D +
AcrVA5 D P D -D -V -D -G ------R L M ---R -W S
uvig_96891_CDS_0005 3 AcrIC11 0.38 View Alignment uvig_96891_CDS_0005 M E A K T L S S D I -D -I -S -I H K L L E E D L E Q V L S -F S C A N T V L D N F F H K -E I F L C A K -H H Y --(60)
M T F K + +
AcrIC11 M N K E T -----Q -I -T -A -----------S -A V --V G E D K R L E F L S K H -F G V R F A R R G E A L
uvig_96891_CDS_0005 L A A Y C A K I V ---H -T N E I V A I F T L A N D S I M I D D N E E K K D F I E E T C S K I S S E Y V S I F E N Q T (120)
+ + + + TL N +
AcrIC11 -V F A W L L R L A K V P I E W T R L Q Y Y T L S N S G F Y L A -P ----------------------R ---
uvig_96891_CDS_0005 S Y P A I N I G H L G V K E D F Q S K G I G Q K I I D F V I Y T F C -N Y -N M S G C Q F -I -T V D S L -------(180)
+ I ++ V+ Q +S+
AcrIC11 --E -L R I S E C E -L --------S A D A V G I V A T M -L T -L R -----Q -L -A -H E S A A C V E A D S
uvig_96891_CDS_0005 ------N ----N K R T N K F Y S R N Y F Y N Q T N S D C T S A T R R M Y K P -L -Q I Y K D D S D L E (235)
+ + Y + Y+ ++
AcrIC11 T Y P A A K L A V T A S V K F A Q Q Y H H L A A Y S -V K ---H -------A E S -I -N I Y --R A I D
uvig_96891_CDS_0005 4 AcrIF5 0.37 View Alignment uvig_96891_CDS_0005 M E A K T L S S D I D I S -I H K L L E E D L E Q V L S F S C A N T V L D N F F H K E I F L C A K H H Y L A A Y C A K I (60)
M + + E
AcrIF5 M S -------R P T -V V T -V T E -T P R ------------------------------------
uvig_96891_CDS_0005 V H T N E I V A I F T L A N -D S I M I D D N E E K K D F I E E T C S K I S S E Y V S I F E N Q T -S -Y P A I N I G H (120)
+ +
AcrIF5 -----N P G ---S -Y E -------------------------------V N -V -E R D G K M V V G
uvig_96891_CDS_0005 L G V K E D F Q S -K -G I G -Q -K I I D -F V I Y T F C N Y N M S G C Q F I T V D S L N N K R T N K F Y S R N Y F Y (180)
+ K + + + G +
AcrIF5 R A R A -G -S D P -G A -A A -A K -A M Q -M A M E W ------G S P N Y V I L G ----------------
uvig_96891_CDS_0005 N Q T N S D C T S A T R R M Y K P L Q I Y K D D -S D -L E (210)
S ++
AcrIF5 ----S -----N K V L A F I P E Q L ---R --V K M
uvig_96891_CDS_0005 5 AcrVA2 0.36 View Alignment uvig_96891_CDS_0005 M E --A K T ---L ---S -S -----D ---I -------------D -------------------(60)
M +
AcrVA2 M H H T I A R M N A F N K A F A -N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G
uvig_96891_CDS_0005 ---------------------I --S I H K L L E E D L E Q V L S F S C A N T V L D N F F H K E I F L C A K (120)
I L EE + + + F C+
AcrVA2 G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T --P T S I F L N L P D W C V Y
uvig_96891_CDS_0005 H H Y L A A -Y C A -K I V -H T -N E I V A I F T L A N D S I M I D D -N E E K K D -F I E E T C S K I S S E ----(180)
A A I + + + + +
AcrVA2 V D I S S A Q -I A T F D D G V -A K H I K G F W A I Y D I -V E M --N -----G I -N H D V L D F V V D T D T D D
uvig_96891_CDS_0005 Y V S I -F E N Q T -S -Y -P -A ----I N I G H -L G V -K E D F Q S K G I G Q K I I D F V I Y T ---F C ---(240)
V + + + +D +S + ++ ++
AcrVA2 N V Y V P -Q P F -I -L -S -S -G Q S V A E V L D Y G A S L F D D D T S N T L I K G L L P Y L L W L C V A E P D I T
uvig_96891_CDS_0005 N -Y N M S -G C Q F I T V D S -L -----N N K R T N K F Y S R ----N Y F -----------Y N Q -T ---(300)
+T +
AcrVA2 -Y K G L P V S R E E L T R P K H -S I N K K -T G A F V T P S E P F I Y Q I G -E R L G S E V R R Y Q S I I D G E Q K
uvig_96891_CDS_0005 --N S D --C --------------T --S A T --R R M Y K P L Q I Y K D D S D -L E (348)
+A R P+
AcrVA2 R N R P H T K -R P H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A V -F V N S G R V S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;