3D Structure for uvig_96034_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.68 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_96034_CDS_0024 1 AcrIE6 0.74 View Alignment uvig_96034_CDS_0024 M T -I Q E Q I K E L D T ----R I E M -Q S N L I D R Y A K A ---N K I ----A P D F Y W D E L Y Q L V D E R N (60)
M+ +E + ++ + + D L + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D -E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_96034_CDS_0024 N L V K -K -N -K L N I A H V M I I --Q C (83)
++ +A + I
AcrIE6 E I L E E -Q -Y P G H A A D L S I K N L C P
uvig_96034_CDS_0024 2 AcrIIC4 0.59 View Alignment uvig_96034_CDS_0024 M -T I Q E Q I ---K ---E ---------------L ---D T R I E -M ----Q S N L I D -R Y A K A N K (60)
M + + + + +K
AcrIIC4 M K I T S S N F A T I A T S E -N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F -K -N E N Y S K
uvig_96034_CDS_0024 I A P D -F Y W D E L Y Q -L -V -D -E R N -N -L -V K -K N -K L N I A H V M I I -Q C (107)
+ + F + L + I
AcrIIC4 E L A E K F N K E ----A -V -N -E -A V E -K -L -Q K -A I D L -A E -K Q G I Q -F
uvig_96034_CDS_0024 3 AcrIE1 0.57 View Alignment uvig_96034_CDS_0024 M -T ----I Q E Q I ----K -E ----------L ----D -T --------R -I E -M Q S N L I D R Y A (60)
M +Q + + Q N + Y+
AcrIE1 M E K K L S D A Q V A L V A A W -R K Y P D L R E S L E E A A S I L -S -L I V F Q A E T -L -S D -Q A N E L A N Y I
uvig_96034_CDS_0024 -K A N K I ---A P -D F Y -W D -E -L -Y -Q -L -V -D -E -R N N -L V K K N K L N I A H V M I I -Q -C (118)
+ D + + + I
AcrIE1 R R Q G L E E A E G A C -R N I -D I -M -R -A -K -W -V -E -V C G -E V N Q H G I R -V Y G D A I D R D V D
uvig_96034_CDS_0024 4 AcrIF23 0.56 View Alignment uvig_96034_CDS_0024 M -T I Q E Q I K E -------L D ---------T R I E ----------------------------(60)
M + Q + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_96034_CDS_0024 ------------M --------Q S N L I D R Y A K A N K I A P D F Y W D E L Y Q L V D E R N N L V K K --- (120)
+ P + ++ RN +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
uvig_96034_CDS_0024 -------N ----K L --------N ----I --A H -V -M I I -Q --C (163)
+ A +
AcrIF23 F V M Q Q K A L L A Q H R -S A K A A G Q A D K V A K -I A A E Y -N A L T A R W G F
uvig_96034_CDS_0024 5 AcrIIA28 0.55 View Alignment uvig_96034_CDS_0024 M -T --I Q ----E -Q I -K E ----L -D T R I E M Q S N L I D R Y A K A -N K -I -----A P D F Y W D -E (60)
M T + AK I
AcrIIA28 M K T I F T K K Q T E -E L -L N D I S I E K Q K E L F N S M H D F R S Q H A K -E -A R I P G W S D K Y N K L E K K -
uvig_96034_CDS_0024 -L Y Q L V D E R N N L V K K N ----K L --N I A H V M I -I Q C (95)
L + N+ +
AcrIIA28 M L S D F E E V T G I K Y D T L E S E L I -W D N L S N K F -L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;