3D Structure for uvig_95085_CDS_0063 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.70 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_95085_CDS_0063 1 AcrIE6 0.71 View Alignment uvig_95085_CDS_0063 M N K E K F I E E L E S K I S E V I E M A L E Y A K K V K D G N D K T N I L N I E Y L M G E Y Y A Y E S L M Q N L -D W (60)
MN E LE+ I A E ++ + +M Y + +
AcrIE6 M N --N D T E V L E Q Q I K A F E L L A D E L K D R L P -T L E I L -S P M Y T A V M V T Y D L I G K Q L A S -R -R
uvig_95085_CDS_0063 D K F V E L H E -K Y V K S W N E C Q N T I D K L Y H (87)
+E+ E Y +I L
AcrIE6 A E L I E I L E E Q Y P G H -A A D L -S I K N L C P
uvig_95085_CDS_0063 2 AcrIE1 0.62 View Alignment uvig_95085_CDS_0063 M -N ----K E K F I E E -----------L ----E S K ----I -S E V I E -M -A L E Y A K K V K D G N -(60)
M + S +E + A +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S -L E E A A S I L S L I -V F -Q A E T -L -S D Q A N E L A N Y I R
uvig_95085_CDS_0063 D K T N I L N I E Y L M G -E Y Y A Y E S L M Q N L D W -D K -F V E L H E K Y V K S W N E C -Q N T I D K L Y H (117)
++ +E K VE+ ID+
AcrIE1 -R Q ---G L E ----E -A E G A C R N I D I M R -A -K W -V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_95085_CDS_0063 3 AcrIIC4 0.58 View Alignment uvig_95085_CDS_0063 M -N K E -K F I E E L E S K I --S E -V I E M A L E Y A K K V K D G N D K T N I L N I E Y L M G E Y Y A Y E S L M Q (60)
M + + + K +
AcrIIC4 M K I T S S N ----F A T I A T S E -N ---F -A K L S V L P K -N H R E P I K G L F K S A V E Q F S S A R D F F K
uvig_95085_CDS_0063 N L ----------D -W -D K F V E L H E K Y V K S W N E C Q N T I D K L Y H (102)
N + E+ EK K +
AcrIIC4 N E N Y S K E L A E K F -N -K E A V N E A V E K L Q K A I D L A E K Q -G I Q -F
uvig_95085_CDS_0063 4 AcrIIA28 0.55 View Alignment uvig_95085_CDS_0063 M N ---K E K F I E E -L E S K I S E V I E -M A L E Y A K K V K D G -N D K T N I L -N I E Y L M G E Y Y A Y E S L (60)
M K EE L E + + S
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P -G W S D K Y N K L E K K M L S D
uvig_95085_CDS_0063 M Q -N L D W D K F V E L H E K Y V K S W N E C Q N T I D K L -Y -H (95)
+ K L + W K Y
AcrIIA28 F E E -V T G I K Y D T L E S E -L -I W D N ---L S N K F L Y N S
uvig_95085_CDS_0063 5 AcrIF23 0.54 View Alignment uvig_95085_CDS_0063 M -N K E K F I E ---E ----L E --------S K -------------------I -----------(60)
M N +++
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I -A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_95085_CDS_0063 ----S ----E V I E M A L E Y A K K V K D G N D K T -N -I -L N I E Y L M G E Y Y A Y E S L M Q N L --D W -- (120)
E A + G A N
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D -Q -A E M A C D P S G L L T A A K F W I E N R N D S A Q E
uvig_95085_CDS_0063 -D ----K -F -V -E -L -H E -K -----------Y -V -K -S W -N E -C -Q -N -T I D K -L -Y H (178)
AcrIF23 I A G F V M -Q -Q -K -A -L L -A Q H R S A K A A G Q A D K V -A -K I -A A -E -Y -N -A L -T A R -W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;