3D Structure for uvig_91629_CDS_0170 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_91629_CDS_0170 1 AcrIIA27 0.74 View Alignment uvig_91629_CDS_0170 M K Y -L V -G T M C G G L M E D -P E P R F D G -P Y L I V E A S D E E T A R K -L Y N K A T N A ---S Y -F Y G D (60)
MK + + L E VEA A K + + D
AcrIIA27 M K T F N I I V S E S A N L K E -H -S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K -F N M R D
uvig_91629_CDS_0170 V --M -G H E --T N I G W I V T N P H V S Q Y G L K Y A L N E A K I L (97)
+ L +
AcrIIA27 L T A I D N T H R R A W G -----R R -Y --------L R V -E E A
uvig_91629_CDS_0170 2 AcrIE2 0.64 View Alignment uvig_91629_CDS_0170 M K -Y L V G T M C G G L M E D P -E P R F D G P Y L I -V E -A S ---D -E E T -A R K L Y N K A T N A S Y F Y G D (60)
M YL+ + E F + A + +
AcrIE2 M N T Y L I D P R K -N -N D N S G E R -F ----T -V D -A V D I T A A A K S -A A Q Q I L G E E F E G L V Y -R E
uvig_91629_CDS_0170 V M G H ---E -T -N I G W I V T N P H -V S Q -Y G L K -Y -A -L N E A K I L (102)
G ++ + + L
AcrIE2 T -G E S N G S G M F Q A Y H H L H G T N R -T -E -T T V G -Y -P F H V M E -L
uvig_91629_CDS_0170 3 AcrIC9 0.58 View Alignment uvig_91629_CDS_0170 M K Y L V G T M C G -G L M E D P E P R F -D G P Y L I -V E A S D E E T A R K L Y N K A T ---N A -S Y -F Y G D V (60)
M L + + + ++ + +
AcrIC9 M E T K -M ---T S -F Y K I T A ---Y N S Q A L -Y -F W G T D A D V D R Y V D W L N R D R E I N V -Y A A E A I
uvig_91629_CDS_0170 M ----G -H E T N I G W I V T N P H V S Q Y G L K Y A L N E A K I -L (97)
+++ G +
AcrIC9 P E A E W -A Q Y E G R D D V L S G E E C ---G W D D F -M S -A -E A
uvig_91629_CDS_0170 4 AcrIIC1 0.58 View Alignment uvig_91629_CDS_0170 M K -Y L --V G T M C G G L M E D P E P R F D G ---P Y L I V E A S D E E T A R K L Y N K A T N A S Y F Y G D V --(60)
M +G DG ++ E K + Y GD
AcrIIC1 M A N K T Y K I G K N --A G -------Y D G C G L C L A A -I S E N E A I K V K Y L R D I C -P D Y -D G D D K A
uvig_91629_CDS_0170 ---M -G H -E T N I G W I -V T N P -H --V S Q Y G L K Y -A L N E A K I L (101)
++ + + + ++ G E L
AcrIIC1 E D W L R W G T D S R V K A A A L E M E Q -Y A Y T S V G M A -S -C W E F V E L
uvig_91629_CDS_0170 5 AcrIIA20 0.55 View Alignment uvig_91629_CDS_0170 M -K Y L V G T M C G G L M E D P E P R F -D -G P Y L I V E A S D E E T A R K L Y N K A T N A S Y F -Y G D V M G H E (60)
M Y V + + +A LY + +
AcrIIA20 M K N Y E V T N E -------V ----K -N -L --N T Q V E T I G Q A V D L Y K E Y G S N T I V W S I --D ---
uvig_91629_CDS_0170 T N I G W I V T N P -H -V S Q Y -G -L K Y -A L N E A K I -L (93)
++ + +
AcrIIA20 -K N E D L I D E V T -E ----L -V -A E Y -A E K G T V I K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;