3D Structure for uvig_90839_CDS_0063 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_90839_CDS_0063 1 AcrIIA7 0.77 View Alignment uvig_90839_CDS_0063 M N F G Q A L E A L K V D K R V A R A G W N G K G M W L R L V H S -E -----D ----V ---R -T C -S D F W G E (60)
M+FGQALE LK + VAR GWNGK + + V +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K -G M F I F M R P E D S L P T N M I V N Q V K S L P E -S F K R W V A N
uvig_90839_CDS_0063 E V N A ---D P P C L L P W I G M K T A D Y R F V P -W L A S Q T D M L A E D W E I I E (105)
D + MK AD V WLASQTDMLA DW I+E
AcrIIA7 N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_90839_CDS_0063 2 AcrIF18 0.53 View Alignment uvig_90839_CDS_0063 M N F G Q A L E A L K V D K R -V -A -R A G W N -G K G M W L R L V -H S E D -V R T C S D F W G -E -E V N A D -P (60)
M+ + + + + E
AcrIF18 M T T --I -K ---A A Y -I -S -K -D Q N W N D G T T T Y W F D V -N G E T F G V -V H G --G E S ----W N -
uvig_90839_CDS_0063 P C L L P W I G M -K T -A D Y R F V P W L A S -Q T D M L A E D -W E I I -E (100)
+ D Q + I E
AcrIF18 A K V ------V -D C -D G A P S D Q Y T V D Q F N I T ---E -D M I A E
uvig_90839_CDS_0063 3 AcrIIA4 0.53 View Alignment uvig_90839_CDS_0063 M N F G Q A L E A L K V -D K R V A R A G W N --G K G -M W -L R L V H S E D V R T C S D F W G E E V -N A D P P C L (60)
MN ++ +K D V G +R+ S+ +
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L -I I R V N N D G N E Y V I S E ----S E N E ----S I
uvig_90839_CDS_0063 L -P W I G M K T A -D Y R F V P W L A S Q T D M L A E D ----W E -I -I E (100)
+ +I + + + +
AcrIIA4 V E K F I S A F --K -N G W N Q E Y E D E E E F Y N D M Q T I T L K S -E L N
uvig_90839_CDS_0063 4 AcrVIA3 0.51 View Alignment uvig_90839_CDS_0063 M N F G Q A L E A L -K V D K R V A R A G W N -G K G M W -L R L V H S E D -V R T C S D F W G -E E V -N A D P P -C (60)
M LE + + + R+ + V S
AcrVIA3 M F -K E F L E K C L R Y G N L Y I L E E T -G D R K K -V K R I S K R H G K V T E A S V L L F D S -G T K ---R T -
uvig_90839_CDS_0063 -L L P W I G M K -T A D Y R F V P -W L A S Q -T D M L A E -D -W E I I E (99)
+ I F+ + +
AcrVIA3 T -I N E I -Y L N -S Q G Y F I I R -D -Q -K -R --L -K -L E -K F K
uvig_90839_CDS_0063 5 AcrIIA12 0.51 View Alignment uvig_90839_CDS_0063 M N ---F -G -Q A L ---E A L K -V -D K R V A R -A G W N -G K G M W L R L V H S E --D V R T C S D F -W G E (60)
M+ ++ +K ++ + + V G
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E K H V S D ----A -G V
uvig_90839_CDS_0063 E V N A D P P C L L P -W I G M K T A D Y R F V P W L A S Q T D M L A E D --W E I I -E (105)
+ E
AcrIIA12 Y -Y G E D F E -F D G -F E I F -E -D --------D L -I Y T R S Y D K E E -L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;