3D Structure for uvig_86537_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 81.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_86537_CDS_0003 1 AcrIE1 0.72 View Alignment uvig_86537_CDS_0003 M A K N F N Q G ----R -R -A E -R Q F -------K -Q -K -L -R T -M I S -S -A A H T Q N I A D Q A M D L (60)
M K + A R S + ++ DQA +L
AcrIE1 M E K K L S D A Q V A L -V -A A -W R K -Y P D L R E S L E -E -A -A S -I L -S L -I V F Q A E T L S D Q A N E L
uvig_86537_CDS_0003 A G Q F M T E D A I S N S D A Y R V I E N V S -C A C E E A M Q -V L I E E L K K G T R L Y E I L P D D S D -D -I -K (120)
+ + E + AC + +
AcrIE1 -A N Y I R R Q G L ---------E E A -E G A C R -N I D I -M R A K W V ---E V C G E V N Q H G I R -V -Y -
uvig_86537_CDS_0003 -R -K -A I E E -L (131)
+ +
AcrIE1 G -D -A I D R D V D
uvig_86537_CDS_0003 2 AcrIE6 0.65 View Alignment uvig_86537_CDS_0003 M A K N F N Q G R R A E R -Q -F K Q -K -L -R -T -M I S S A A H T Q N I A D Q A M D L A G Q F M T E D A I S N S D (60)
M + +AD + D + + S
AcrIE6 M N -----------N -D -T E V -L -E -Q -Q ----I K A F E L L A D E L K D R L P T L -----E I L S P
uvig_86537_CDS_0003 A Y R V I E N V S C -A C E E A M Q V L I E E L K K G T R L -Y -E I L P D D S D D -I K R K A -I -E -E -L (116)
Y ++ + EL E P D
AcrIE6 M Y T A V M V T Y D L I -G K Q L A S R R A E L I E I ---L -E E Q Y P G H A A D L ----S I -K -N L C P
uvig_86537_CDS_0003 3 AcrIIC4 0.60 View Alignment uvig_86537_CDS_0003 M A K N F N Q -G R R A E R Q F -K Q K -L R T M I S S A A H T Q N I A D Q A M D L A G Q F M T E -D A I S N -S D A Y (60)
M + ++ + + + + + A+ + S A
AcrIIC4 M K I T S S N F A ----T I A T -S E N F A K L S V -------L P K N H R E P I K G L F -K S -A V E Q F S S A R
uvig_86537_CDS_0003 R V I E N V S C A C -E E A M -Q V L I E E L K K G T R L Y E I L P D D S D D I K R K A I E E L (108)
N + E E + + E L D K
AcrIIC4 D F F K N E N Y -S K E L -A E K F N K E A V N E ---A V E K L Q K A I D L -A E K Q G I Q F
uvig_86537_CDS_0003 4 AcrVA1 0.55 View Alignment uvig_86537_CDS_0003 M A -K --N -F N Q G R R A E -R Q -F ---------K Q K -L R T M I S S -------A -----------(60)
M + +
AcrVA1 M Y E A K E -R ------Y A K -K K M Q E N T K I D T L T D E Q H D -A L A Q L C A F R H K F H S N K D S L F L S E
uvig_86537_CDS_0003 A H T ---------Q -N -I A -D -Q A M D L A G Q -F M T ----E -----------D ------A I -S (120)
Q + ++ +
AcrVA1 S A -F S G E F S F E M Q S -D E -N -S K L R E V G L -P T I E W S F Y -D N S H I P D D S F R E W F N F A N Y S E -
uvig_86537_CDS_0003 -N ------------S D A Y R V I E N V S C A C E -E -A -M Q V L I E E L K K G T R L Y E I L P D D S -D D I (180)
D E V M E + + ++
AcrVA1 L -S E T I Q E Q G L E L D L D D D E T Y E L V Y D E L Y T -E -A M G E Y E E L N Q D I E K Y L R R I D E E H G T Q Y
uvig_86537_CDS_0003 K R K A I E -E L (189)
AcrVA1 C P T G F A R L R
uvig_86537_CDS_0003 5 AcrIF23 0.55 View Alignment uvig_86537_CDS_0003 M A K --N F -N Q G R R ----A E ------R Q -----F --------------------------K (60)
M ++ +
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L --E T G I A -Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A
uvig_86537_CDS_0003 Q K L -R -T M I S S A A H T ----Q N I A D Q A M D L A G Q F M T E D A I S N ----S D A Y R V I E -N V S C A C (120)
++ A++ I Q E A + A I N +
AcrIF23 K T -F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I -E N R N D S A
uvig_86537_CDS_0003 E E A M Q V L I E E L K K G T R L Y E I L -P D --------D S D D I K R K A I E E --L (167)
+ K + +
AcrIF23 -Q E I A G F V M Q Q K A L L A Q H R S A K A -A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;