3D Structure for uvig_84799_CDS_0035 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.25 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_84799_CDS_0035 1 AcrIE1 0.72 View Alignment uvig_84799_CDS_0035 M S N E E V Q K I L D S M -H G I N P E N L Q G E A K K L F E A I M K I A D E R D S L -R K T V E R Q N L -E I I S Q K (60)
M ++ L A K D R+S + + Q
AcrIE1 M -E K K L S D ---A -Q -V -----------A L V A A W R K Y P D L R E S -L -E E A A S I L S L I V F -Q A
uvig_84799_CDS_0035 Q -V H D Y D L -K M I D D V K G N A V K L Y K E L E K K D Q I I N -A -M -V -E Y -I -A N L -D I D E -D I C K K (120)
+ D + + ++ E+E I + +
AcrIE1 E T L S D -Q A N E L A N Y I R R ---Q G L E E A E G A C R N I D I -M -R -A -K W -V -E V C G E V N Q ----H
uvig_84799_CDS_0035 M G -I F Q D C E I K D V E N C K K C I I E Y F K -N K M R Q K -C -D T A T T E K (162)
G
AcrIE1 -G I ------R ----V --------Y G D ------A -I -D R D -V D
uvig_84799_CDS_0035 2 AcrIC3 0.58 View Alignment uvig_84799_CDS_0035 M S N E E -V Q -K I L D S M H G -I N P E N L Q G E A K K L F E A I M K I A D E R D S L R K T V E R Q N L E I I S -Q (60)
MS + +N E + +V
AcrIC3 M S I -Q V -T S T -N G R ---T V N L E ---I -------E ---L G S V V A -S S G Q V K F M A D K T D R G -
uvig_84799_CDS_0035 K Q V H --D Y -D L K M I D D V -K G N A --V K L Y -K E L E K K D Q I I N A M V E Y I A -N L -D I D E D I C K K (120)
L GN + ++NA +A ++ +
AcrIC3 ---L E S -R F -L V P E ---A -G N R R I --E V A -L T G R D L E A A N A L F S E L A A -S V E A T N E ----
uvig_84799_CDS_0035 M G I F Q D C E I K D V E N C K K C I -I E Y F K N K M R Q K C D T A T T E K (159)
+ E
AcrIC3 ------M Y ----R E L D A E -R -A Q ---------I N K A L E G
uvig_84799_CDS_0035 3 AcrIB9 0.57 View Alignment uvig_84799_CDS_0035 M S N E E V Q K I L D S M H G I N P -E -N L -Q -G E -A K K L F E A I M K I A D E R D -S -L -R K T V E R Q N L E (60)
M+ L K + NL
AcrIB9 M N K F A -F E N ---D -----K -Y -L E -R -N I ----K -----------A -V -V E K I A R D F N L H
uvig_84799_CDS_0035 I I S Q -K Q V H D Y --D L --K M I D D V K G N A V K L Y K E L E K K D -------Q I I N A M -V -E --Y I A (120)
+ S + + D + + D I
AcrIB9 L K S K Y S K D C E F T V -V A D N S F D N I E N -S T I F L E I K -R N D G K A C Q D H H I Y A E -Y -E C D E D D N
uvig_84799_CDS_0035 N -L -----D --I -D ----E D I C K K M G I -----F Q -D C -E I K D -V E N C K -K C I -I E -----(180)
C D K
AcrIB9 -E -Y I A L T -V K F Y G S S A S -N Q I N T V Q G I K S S K Y A S -C I V -S D T D N -Q L S K -S I -H E L N L K
uvig_84799_CDS_0035 ---Y -----------F ---------K N K -M -R -------Q K ---C --D ---T A T --T -E K (240)
+ R D
AcrIB9 K E K E Q Q E A W N K K E A E -Y A R K K Q A Y V S Q -S -Q R E K Y E D I F D L P F D -F Y D Y I D K K E Q G -L -I
uvig_84799_CDS_0035 4 AcrIIA19 0.56 View Alignment uvig_84799_CDS_0035 M S N E E V Q K I L D S M H G I -N P E N L Q G E A K K L F E A I M K I A D E -R D S L R K T V E R Q N -L E I -I S Q (60)
M + + + +S V R E
AcrIIA19 M K -L -I V E V -------E ------E ---T N Y K N L V N Y T K L T N E S H N I L V N R L I S -E Y I T -K
uvig_84799_CDS_0035 K Q V H D -Y -D -L -K M I D D V K G N A V K L -Y K E L E K K D Q I I N A M V E Y I A N L D -I D E D I C K K M G I (120)
+ + + I L +++ +
AcrIIA19 ---P Y E -L -R -L D L S E R ---Y S N R D L I E F K F M L I E Y C K E A L Q D I K E L A N S -D E A Y E T D E A
uvig_84799_CDS_0035 F Q D C E I K D V E N C K K C I I E -Y F K N K M -R Q -K C D -T -A -T T E K (161)
F E + K
AcrIIA19 F E A V F R Q L F E E V I S N P -D T V -L K A -F -H S -Y T S -F -L E E N K
uvig_84799_CDS_0035 5 AcrIIA11 0.56 View Alignment uvig_84799_CDS_0035 M S N E E V Q K I L D S M H G I -N P E N L ---Q G E A -K K L F E -A I M K I A D E R D S L R K T V E R Q N L E I I (60)
M + + + Q E D L + + +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E -A -----G W Y D W F C D -D K A L A G R L A K I W G I L K
uvig_84799_CDS_0035 S Q K Q V H D Y D L K M I D D V K -G -N A V K L Y K E L E K K D Q I I N A M V E Y I A N L D I D E D I C K -K M -G I (120)
+ + + + + +DE+ G
AcrIIA11 G ---I ----------T S D -Y I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G -
uvig_84799_CDS_0035 --------------F Q D --------C E I -------K -D V E N C K K C I I E --------Y --- (180)
F+ C + +
AcrIIA11 V A I D D K R R E K K Y V I F T -A R N D Y E N E C G F N N V R E V R -Q F I N G W E D E L K N E E F Y K A R E -K K R
uvig_84799_CDS_0035 -----F -----K -N -K -M R Q K C D T A ---T -T E K (213)
Q+ D + E
AcrIIA11 Q E M E E -A N N K F -A -E -I -M Q R A D E I L W N -L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;