3D Structure for uvig_83479_CDS_0007 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.60 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_83479_CDS_0007 1 AcrIIA21 0.70 View Alignment uvig_83479_CDS_0007 M K S T F A N Q N I F E I N R D M P A K G A K R P Y L A I Y N D N L F G A M -Q E L S G E A A I K L Y I Y L A A N -Q -(60)
M + +I L + I +Y+ L
AcrIIA21 M D -Y -D -N E N ----------------Y L I P K I L L Q D D F Y S S -L S A K D I L V Y A V L K D R Q I E
uvig_83479_CDS_0007 -----N -----G -F N L N F S P K H F A L E C G M S E N S A R A A A K Q L M E K N Y L V Q D D --T N H Y K F Y (120)
LNF A S ++ + L E N + + Y
AcrIIA21 A L E K G W I D T D G -S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y -G -Y
uvig_83479_CDS_0007 E V P K K S I E F I N R K D N E R R L A K T T D G F I E I T Y A A F R E E T K A S G W T D K D I D D N W E T F E V V E E (180)
+ +
AcrIIA21 S L -P -----------------------------------------------Y -K T Y -I N -
uvig_83479_CDS_0007 N Q K (183)
AcrIIA21 -E V
uvig_83479_CDS_0007 2 AcrIA3 0.49 View Alignment uvig_83479_CDS_0007 M K S T F A N Q N -I F E I N R D M P A K G A K R P Y L A -I Y N D N -L -F G -A M Q E L -S G E A A I K L Y I Y L A (60)
M ++
AcrIA3 M S F Y I ----M -Y I K V K E ------------M -----S -E -Q K -Q I S -L -R S K ---------
uvig_83479_CDS_0007 A N Q N G F N L N F S P K H F A L E C G M -S E N S A R -A A -A -K Q -L M E K N Y L V Q D D T N -H Y K F -Y E V P (120)
+ E D++ Y+
AcrIA3 ---------------------Q -K ----E -L L -Q -R F -F E I A --E V D E N G D L C I P L Y D S S
uvig_83479_CDS_0007 K K S I E F I N R --K -D ---N E R R L -A K T -T D G F I E I T Y A A F R E E T K A S G W T D K D I D D N W E T F (180)
+ R+ I +
AcrIA3 G D L T -L F K Q D S R K Y Q M Y A Y F R I L R -L I K K Q I F F I K V ---K K V K -R D K K F L C M ---H S N V I
uvig_83479_CDS_0007 E V V E E -N Q -K (190)
+ V
AcrIA3 D Q V K S V -L E S
uvig_83479_CDS_0007 3 AcrVA2 0.44 View Alignment uvig_83479_CDS_0007 M K S T F -A N Q N I ---F E I ----N -R -D M P A K G -A K R -P --Y L A -----I Y N D N L F G A -M Q E (60)
M+ T + F M A + + + L
AcrVA2 M H H T I A R M N A F N K A F A N A K D C -Y -K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A -L Y E L
uvig_83479_CDS_0007 ----L ----------------------------------S ----G E A A I -K L Y I Y L A A N Q (120)
+
AcrVA2 R G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T -P T S I -F L ---N L P
uvig_83479_CDS_0007 N G F N -L N F S P K H F A L E C G M ---S E N S A R A A A K Q L M E -K N Y L ------V -Q -D -D ------(180)
+ S A A+ + E V D
AcrVA2 D W C V Y V D I S S A Q I A T F D D G V A K H I K G F W A I Y D I V -E M N G I N H D V L D F V V -D -T D T D D N V Y
uvig_83479_CDS_0007 -T N -----H Y K -F -Y -E -V -P -K K -S I E F I N R -----------------K ---------D (240)
+ +
AcrVA2 V P Q P F I L S S G Q S -V -A -E -V -L D -Y G A S L F D D D T S N T L I K G L L P Y L L W L C V A E P D I T Y K G
uvig_83479_CDS_0007 ---N ---E -R R L ---A --------K -T -T D G -F I E -I -----------T Y A -A F R E E T K - (300)
+ R + ++ FI + E
AcrVA2 L P V S R E E L T R -P K H S I N K K T G A F V -T -P S E -P F I -Y Q I G E R L G S E V R R Y Q -S I I D G E -Q K
uvig_83479_CDS_0007 A S G -W -------T D K D I D D ----N -W E ----------T F E V -V -E -E -N Q K (351)
+ V +
AcrVA2 R N -R P H T K R P H I R R G H W H G Y W Q G -T G -Q A K E F R V R W Q P A V -F V N S G -R V S S
uvig_83479_CDS_0007 4 AcrIF16 0.43 View Alignment uvig_83479_CDS_0007 M K S T F A N Q N I F E I -N ---R D M P A K G A ---K R P Y L A I Y N D N L F G A M Q E -L --S G E A A I K L Y (60)
M + E+ R P+ + A+ +L
AcrIF16 M S L S D -K K E Q K E A Y L D A L R I A P L --D R G V L K R I H A V N D N T L D K W L Y V A D R Y P --T F R A C W
uvig_83479_CDS_0007 I Y L A A N Q N G F N L N F S P K H F A L E C G -M S E N S A -R A A A K Q L M E K N Y L V -Q D D T N H Y K F Y E V P (120)
+ ++ + + +++ +
AcrIF16 E L W M F Q R K --R R V L I S R K L H V L I N R S ---T -N ----R T I E A F E ---K T Y P P E E R V V G K S Y
uvig_83479_CDS_0007 K K S I E F I N R K D N E R R L A K T -T D G F I E --------I -----T Y A A F R E E T K A S G W T D K D I D (180)
+ + + G +Y K G + D
AcrIF16 R D L V T E K G E R S A -N -M Y I -I -N G E -V V G A K D A S I -L L G Y S S Y N T L Y A K M K R L G I Q P G D D I
uvig_83479_CDS_0007 D -N -W -E T F E V V E -E -N Q K (199)
AcrIF16 S H -L -K P E K R G R -K -K E C S
uvig_83479_CDS_0007 5 AcrVIA1_Lse 0.43 View Alignment uvig_83479_CDS_0007 M K S T F A N Q N I F -E I -N R D M P A K G ---A ----K -R -P --------Y ----L -A -I -Y N D N L (60)
M + K +
AcrVIA1_Lse M I Y Y I K D L K V K G K -I F E N L M N K E A V E G L I T F L K K A -E F E I Y S R E -N Y S K Y N -K -W F E -M W
uvig_83479_CDS_0007 F -G A M -Q E ---L -S -G E A A I K L Y I Y L A A N Q N G F -N L N F ---S P K H F A L E C G -----M -S E (120)
+ +L + L + +
AcrVIA1_Lse K S P -T S S -L V F -W K N Y S F R C H L L F V I E K D ---G E C L G I P A S V F E S V L Q I Y L A D P F A P D T K
uvig_83479_CDS_0007 N S A R A A A K Q L M E K N ---Y -L ---V Q D -D -T N H Y K F Y E V P K K S I E F I N R --------K ---(180)
+ + + K +
AcrVIA1_Lse E L F V E V C N L Y E C L A D V T -V V E H F E A -E -E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E
uvig_83479_CDS_0007 -D -N E R R L -----A K T -T D G -F I E -I -T Y -A -A F R E E T -K A S -----G -W T D K D I D D N W E (240)
+ + + E + +
AcrVIA1_Lse F -L D -T -I A T N K K S Q -K Y N -Q I Q -G -K I -Q -E I N K -E I A T L Y E S S E D -Y I F T E Y V S N L Y R
uvig_83479_CDS_0007 T --------F -E V -V E E N Q K (260)
+ E
AcrVIA1_Lse E S A K L E Q H S -K Q -I L K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;