3D Structure for uvig_81958_CDS_0112 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 95.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_81958_CDS_0112 1 AcrIIA20 0.86 View Alignment uvig_81958_CDS_0112 M Y K R K T K D V Y I I R G R Y L G M P E -E -D I D T A D -T F K E A R Y L K G -E Y E L A F G T D W N -------(60)
M + ++ + + + N
AcrIIA20 M K N Y E --V --------T ----N -E -V K N L N T Q V E T I G Q A V -D -L Y K E Y -G S -N T I V W S I D
uvig_81958_CDS_0112 L ---Y I ---E K R ---R -E -K I --E C V (86)
I K
AcrIIA20 K N E D L I D E V T E L V A E Y A -E K G T V I -K
uvig_81958_CDS_0112 2 AcrIF9 0.85 View Alignment uvig_81958_CDS_0112 M Y K R K T K D V Y I I R G R Y L G M -P --E -E D -I D T A D T F K E A R Y L K G E Y E L A F G T D W N L Y I E K R (60)
M +YII+ A + A+ + IE
AcrIF9 M K -----A A Y I I K E V Q N I N S E R E -G -T Q -I E A T S L S Q A K R I A S K E Q C F -H G -T V M R I E T V
uvig_81958_CDS_0112 R E -K I ---------E -C V (78)
+ C
AcrIF9 N G L W L A Y K E D G K R W V D C Q
uvig_81958_CDS_0112 3 AcrIF15 0.85 View Alignment uvig_81958_CDS_0112 M Y K R K T K D V Y I -I R G R Y L G M ---P E -E -D ------I D T ---A D T F K E -A R -Y -L K G E Y E L (60)
M + I + +G+
AcrIF15 M -T -----T I T I A Y E -V S N D K V E T I K -T -M V E S Q Q I H N V N F N G E ---E F -T -I E R G D -F T
uvig_81958_CDS_0112 A F G T --D W N L -Y I E K R R E K I E -C V (84)
+ + K + I
AcrIF15 S I D K D E A E H V K L L N K I Q D I I H G Y S
uvig_81958_CDS_0112 4 AcrIIA12 0.85 View Alignment uvig_81958_CDS_0112 M Y K R K -T K D ------------V -Y I I R G R --Y L G M P -E -------E D -I D T A -------D (60)
M K D + + A
AcrIIA12 M S K T M Y K N D V I E L I K N A K T N N E E L L F T S V E R N T R E A A T Q Y F R C P E K -H V S D A G V Y Y G E D -
uvig_81958_CDS_0112 -T F K E A R Y L K G E -Y E L A F G T D W N L Y I E K R R E K I -E C V (97)
F D L + E
AcrIIA12 F E F D G F E I ----F -----E -D -D L I Y T R S -Y D K E E L N
uvig_81958_CDS_0112 5 AcrIE8 0.84 View Alignment uvig_81958_CDS_0112 M Y K R K T K D V Y I I R G R Y L G M P E E D I D --T A D T F K E -A R -Y -L K G E Y E L A F G T D ---W -N --(60)
M T I PE + + KE + +
AcrIE8 M ----T --T I T I N T Y --D -P E A R -F N M S G E E A K E F F -A -F V E E -Q A K V S -G -F D V Y Y D S C
uvig_81958_CDS_0112 L -Y I E K R -R ---E -K I E C V (79)
Y++ E
AcrIE8 -T Y V D E E S E R F V E K C F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;