3D Structure for uvig_81609_CDS_0136 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.92 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_81609_CDS_0136 1 AcrVA5 0.75 View Alignment uvig_81609_CDS_0136 M N Q I T I T V D K R V G V I F K S P F G V C T L S H D V E F I D V P C S P E N P E G Y E E V P Y V L I S G L D V S P E (60)
M I G S V I ++V+
AcrVA5 M -K I E -L -----------S G G Y I C Y S I -E -----------------E D E V T I D M V E V T -T
uvig_81609_CDS_0136 H R R Q G H G R A L L R A A I D Y A K R E F P H L P L R L S A V P D P D S V S L E S L I D F Y A S R G F E T I E T N -P (120)
+RQG G L+ + D A+ LP+ L A P DS+S E LI+FY S FE
AcrVA5 -K R Q G I G S Q L I D M V K D V A R E -V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D
uvig_81609_CDS_0136 V F C M E Y R G (128)
M
AcrVA5 G R L M R -W S
uvig_81609_CDS_0136 2 AcrIB1 0.65 View Alignment uvig_81609_CDS_0136 M N Q I T I T V -D ---------K ----------------R ----------------V -G V I F K (60)
M + ++ +
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_81609_CDS_0136 S -P ---F G V C T L S H D V E F I D V P ----C -S -P -----------E -N -P -E G Y E E V P Y V L I S (120)
S G T+ G L+
AcrIB1 S E D N E I L G Y F T I A N R S L V -I P K E N F G I L -S -K T Q Q K K L G N S A -A -I L K N G D L M T S S F L L G
uvig_81609_CDS_0136 G L D V S P -E H R -R Q G H G R ----A -L -L -R -A -A -I -D -Y -A K -R E F P H L P L R L S A V P D P D S (180)
L + + GR + L
AcrIB1 Q L G K N Y S D D I E N L I T G R E L L T -F -A -Y -D -L -F -L -K -I K -E -L I N V K Y I W L E C Q ---N -
uvig_81609_CDS_0136 V S L E S L I D F Y A S R G F E T I E -T --N -P V F C M E Y -R G (215)
LI FY + GF +E + M
AcrIB1 --E P K L I S F Y Q N F G F K M L E S L T S E E G L K V M I M E L K
uvig_81609_CDS_0136 3 AcrIF5 0.48 View Alignment uvig_81609_CDS_0136 M N -Q I T I T V D K -R V G V I F K S P F G V C T L S H D V E F I D V P C S P E N P E G Y E E V ---------P -(60)
M+ +TV N
AcrIF5 M S R P T V V T V T E T P R ---------------------------N ------P G S Y E V N V E R -D
uvig_81609_CDS_0136 Y V L I S G L D V S P E H R R -Q G H G R A L L R A A I D Y A K R E F P H L P L R L S A V P D P D S V S L -E S L I D F (120)
+ G A++ A A + S
AcrIF5 G K M V V G R A R -A ----G -S D P G A A A A K A M Q M A M E W G S -P N Y V I L G -----S ---N ------
uvig_81609_CDS_0136 Y A S R G F E -T I -E -T -N P -V -F C M E Y R G (147)
+ +
AcrIF5 -K -----V -L A -F -I P -E -Q L R -V -K M
uvig_81609_CDS_0136 4 AcrIIC3 0.45 View Alignment uvig_81609_CDS_0136 M N Q I T I T V -D -K ------R -----V G V I F K S ---P -F G V -C T L S H D V E F I D V P C S P E -N P (60)
M I R + I +
AcrIIC3 M F K R A I I F T S F N G F E K V S R T E K R R L A K I I N A R V S I I D E -Y -L R A K -D T N ------A S L --
uvig_81609_CDS_0136 E G Y E E -V P Y V L I S G L D -V S P E H R R Q G H G R A L L R A A I D Y A K R E F P H L P L R L S A V P D P D S V -(120)
+ Y + + L + A + + + + + + V
AcrIIC3 D ----G -Q Y R ---A F L F -N D ---E S P A M T E F L A K L K A F A E S C T -G I S I D A W E I E E S E Y V R
uvig_81609_CDS_0136 S L E S L I D F Y A S R G F -E -T --I E T N P V F C M E Y R G (153)
D +
AcrIIC3 L P V E R R D ----F L -A -A -A N ---G -K E -I -F K I
uvig_81609_CDS_0136 5 AcrIIA28 0.41 View Alignment uvig_81609_CDS_0136 M N Q I T I T V D K R V G V I F K S -P F G V C T L S H D V E F I D V P C S P E N P E G Y E E V P Y V L I S G L D V S P (60)
M K
AcrIIA28 M K -T I F -T K K Q T E E ----L -L N D ----------I --------------------------
uvig_81609_CDS_0136 E H R R Q G H G R A L L R A A I D Y A K R E F P H L P L R L S A V ---P -D P D S V S L E S L I D F Y A S R G F E T I (120)
+ + L D D + +
AcrIIA28 ---S I E K Q K E L F N S M H D F R S -Q H A -K E ---A -R I P G W S D K Y N K L E K K M L S D F E E V T G I K Y
uvig_81609_CDS_0136 E -T --------N P V F C M E Y -R G (142)
+
AcrIIA28 D T L E S E L I W D N L S N K -F L -Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;