3D Structure for uvig_80787_CDS_0136 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.62 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_80787_CDS_0136 1 AcrIE6 0.71 View Alignment uvig_80787_CDS_0136 M C S E E R D L V C R -------I H R L E D -K L L R S K --------N Y Q E Q M T I Q S A L A N L R M S L Q K (60)
M ++ L + L +L I LA+ R L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K -D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_80787_CDS_0136 L -R ---W R -S D N ---V --R A (80)
+
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_80787_CDS_0136 2 AcrIF23 0.55 View Alignment uvig_80787_CDS_0136 M C S E --E -R D ----L V -C R --------------------------------------I --(60)
M + V +
AcrIF23 M T N F Q T W L D -S A D I P V Q --Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
uvig_80787_CDS_0136 -------H ----------------------------R L E D K L L ----R S -K ----N -Y Q E (120)
LL QE
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F -W I E N R N D S A Q E
uvig_80787_CDS_0136 Q M T I Q S A L A N L R M S L Q K L ----R --W -------R S D N V ---R -A (164)
L + + +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G -Q A D K V A K I A A E Y N A L T A R W G F
uvig_80787_CDS_0136 3 AcrIIC4 0.54 View Alignment uvig_80787_CDS_0136 M C -S --E E R D ------------L V C R -----------I H -R L E D K L L -R S ---K -N Y Q E Q (60)
M + L + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E L A
uvig_80787_CDS_0136 -M -T I -Q S A L A N L R M S L Q K L R W R S D N -V -R A (91)
A+ + LQK+ +
AcrIIC4 E -K F -N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_80787_CDS_0136 4 AcrIE1 0.51 View Alignment uvig_80787_CDS_0136 M C ---S -E -E R D L V -------C R ---------------------I H ----R -L E D -K L L R (60)
M S LV + L + R
AcrIE1 M E K K L S D -A Q V A L V A A W R K Y P D -L R E S L E E A A S I L S L I V F Q A E T L S D Q A N -E L A -N Y I R R
uvig_80787_CDS_0136 S K N Y Q E ---Q -M T I -Q S -A -L -A -N -L -R -M -S L Q K L ---R W -R -S D -N -V --R A (115)
E +
AcrIE1 -Q G L E E A E G A C -R N I -D I -M -R -A -K -W -V -E V C G E V N Q H G I R -V Y G D A I D R D V D
uvig_80787_CDS_0136 5 AcrIIA32 0.50 View Alignment uvig_80787_CDS_0136 M -C -----S -E E R D L V C R ----------------I H -R L E -D ----------------K L (60)
M +
AcrIIA32 M K N E D G K L V V S K A H F G N M I R N C Q S V E D F K K S F E R L T Y -Y S S -E N R E S T V R Q R L K I A E K E Y
uvig_80787_CDS_0136 L ----R S --------K ----------N ----Y Q E -Q M -T -I -Q -S A L A N L R M S L Q K -L --(120)
N + R +
AcrIIA32 -N F K A G V K E D L E I K N T T D K E I L D Y V R N E L S K I D S K K -Q -A -D -K N W S E K N R E H R N -Y -L S
uvig_80787_CDS_0136 R --------W ----------R ---S D N V R A (150)
+ +
AcrIIA32 K R S S A R S F I N N N A T H E D L L E L K K I I E E K L K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;