3D Structure for uvig_75247_CDS_0089 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.78 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_75247_CDS_0089 1 AcrIE6 0.74 View Alignment uvig_75247_CDS_0089 M E D Y Q K R M L D E ---H S E L K D R W L K L N A A L A -K D G F R E K V G D Y Q F K L M N E Q S L G M K K Y Y L A (60)
M + L D L V + Q +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G -K Q ---L A S R R A E
uvig_75247_CDS_0089 L T A R L T D -M -G L L N G D A M ----P -E K (86)
L L + D+
AcrIE6 L I E I L E E Q -Y P G H A A D L S I K N L -C -P
uvig_75247_CDS_0089 2 AcrIF23 0.60 View Alignment uvig_75247_CDS_0089 M E D Y Q K R ----M ---L -D ---E H S E ------L K D ---R W ------L -K L N A A L A ----K -(60)
M Q + + D L+ +
AcrIF23 M T N F Q -T W L D S A D I P V Q -Q N G Q W I -D L E T G I A Y D P S Y N Y A A N T R R -A S L S P R G I D A R A V A
uvig_75247_CDS_0089 -D --------------G F R -E K V G D Y Q F K L M N E ----Q -S L G M K K Y -Y L -A L T A -R L T D M (120)
+ K+ MN L A +
AcrIF23 K -T F G G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q A E -M A C D P -S G L -L T A -A K F W I E N R
uvig_75247_CDS_0089 G L ---------------L -------------------N G ---D A M P -E --K (171)
A
AcrIF23 -N D S A Q E I A G F V M Q Q K A -L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_75247_CDS_0089 3 AcrIIC4 0.60 View Alignment uvig_75247_CDS_0089 M E -D --Y -Q K R M -L -D ----------E H S -E -L K D R W L K L N A A L -A K D -------G F R E K (60)
M + H +K + +
AcrIIC4 M K I T S S -N F A T I A T S E N F A K L S V L P K N H R E -P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E
uvig_75247_CDS_0089 -V G D Y Q F K L M N -E Q S L G M K K Y Y L A L T -A -R L T -D -M G L L N G D A M -P E K (108)
K L +
AcrIIC4 L ----A E K F N K E ----A V N E A V E K L -Q -K -A I D -L ----A E K -Q G I Q F
uvig_75247_CDS_0089 4 AcrIE1 0.59 View Alignment uvig_75247_CDS_0089 M E D ---Y -Q -K -R -M -L ------D -E -H -S E L K D R W L K L N A A L A -----K D --------G (60)
ME + L + + + +++
AcrIE1 M E K K L S D A -Q -V -A -L V A A W R K Y P D -L -R E S L -E E A A S I L S L I V F Q A E T L S D Q A N E L A N -
uvig_75247_CDS_0089 -F R E K V G D Y Q F -K L M -N E Q S L G M K K Y Y L A L T A R L T D M G L L -N G D A M P -E -K (111)
R + + M+ + + ++ G+ GDA +
AcrIE1 Y I R R Q G L E E -A E G -A C -R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_75247_CDS_0089 5 AcrIIA28 0.59 View Alignment uvig_75247_CDS_0089 M E -D ----Y -Q -K R M L D -E -------H -S E -L -K D -R W -L -K L N A A L A K D G F R E K V G D Y Q (60)
M L + + + G+ +K
AcrIIA28 M K T I F T K K -Q -T E E L L N D I S I E K Q K E L F N -S -M H -D F -R -S Q H A K E A R I P G W S D K Y N K L E
uvig_75247_CDS_0089 F K L M N E Q S L G M K K Y Y L A L T A R L T D M G L L N G D A M -P E K (97)
K ++ Y L L L+
AcrIIA28 K K M L S D F E E V T G I K Y D T L E S E L -I W D N L S N -K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;