3D Structure for uvig_74279_CDS_0124 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.95 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_74279_CDS_0124 1 AcrIIA7 0.71 View Alignment uvig_74279_CDS_0124 M D I N I S N -M K K Y I G L K V V K A E P M T M T E A Q K V L G R E L K P A I A E V D G F L V E Y K D G Y K S W S P A (60)
M +
AcrIIA7 M T -F G -Q A L E S L K R ----------------------------------------------
uvig_74279_CDS_0124 S V F N E A Y H R F G K M L F G E A V E A L K S G L A V R R E G W N D K G L C V V K Q V P S H I T G D I -I P N M Q S L (120)
+V R GWN KG + + + + SL
AcrIIA7 ------------------G ------H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L
uvig_74279_CDS_0124 P Q S A K D I L M S R ----E N P -H -I -D -Y -T N Q -M L I I H P D G -R A D S W V P S S S D I F A E D W E V I (180)
P S K + + E+ + DG + W+ S++D A DW ++
AcrIIA7 P E S F K R W V A N N H G D S E T -D -R -I -K -F -T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V
uvig_74279_CDS_0124 D E (182)
E
AcrIIA7 -E
uvig_74279_CDS_0124 2 AcrIC1 0.54 View Alignment uvig_74279_CDS_0124 M D I N I S N -M ---K -K -Y -I ----G L -K V -V K A E P M T M T E -A Q K -V -L G -R -E L K P -A -I A (60)
M + ++ +
AcrIC1 M N N L K K -T A I T H D G -V -F -A Y K N T E T V -I G S V G R ---N D I V M -A -I -D A -T -H -G E -F -N
uvig_74279_CDS_0124 E V D G F L V E Y -K D G Y K S W -S P A S --V F N E -A Y H ----------R -F G -K M ----L F G E A V E (120)
F++ G A N+ E E
AcrIC1 -D K N F I I Y A D T N G N P I Y L G Y A Y L D D N N D A H I D L A V G A C N E D D D F -D E -K E I H E M I A E Q M E
uvig_74279_CDS_0124 A L K S ----G -L A V R ----R -E -G -W N -D K G L C V V K Q V P S H I T G D I I P N M Q S L P Q S A K D I L (180)
++K V+ G V+ + D
AcrIC1 L A K R Y Q E L -G D T V H G T T R -L -A -F D -D -D G Y M T V R L D Q -Q A Y P D ----Y R P -------E -
uvig_74279_CDS_0124 M S R E N P H I D Y -T N Q M L I I H P D G R A D S -W --V ------P --S S S D I F A E D W E V I D E (235)
+ L++ G+ + V S A+DW +
AcrIC1 --N D -D -K H -I M W R A L A L T A T G K E L E V F W L V E D Y E D E E V N S W D F D I A D D W R --E L
uvig_74279_CDS_0124 3 AcrVIA3 0.53 View Alignment uvig_74279_CDS_0124 M D -I N I S N M K K Y I G L K V V K A E P M T M T E A Q K V L G R E L K P A I A E V D G F L V E Y K D G Y K S W S P A (60)
M K +
AcrVIA3 M F K E ---F L E K C L R ----------------------------Y G ----------------
uvig_74279_CDS_0124 S V F N E A Y H R F G K M L F G E A V E A L K S G L A V R R E G W N D K -G L C V V K Q V P S H I T G D I I P N M Q S L (120)
+ E VK + + G + L
AcrVIA3 -------------------------N L Y I L E E T G --D -R K K V K R I S K R -H G K V T E A S V -L
uvig_74279_CDS_0124 --P Q S A K D I L M S R -E N P -H I D Y T N Q M L I I H P D G R A D S W V -P S S S D I F A E D -W E V I D E (177)
+ N + G + +
AcrVIA3 L F ---------D -S -G -T K R T T I N E I Y L -N S Q G Y F I I R -D -Q K R -L --K -L E -K F -K
uvig_74279_CDS_0124 4 AcrIF18 0.53 View Alignment uvig_74279_CDS_0124 M D I N I S N M K K Y I G L K V V K A E P M T M T E A Q K V L G R E L K P A I A E V D G F -L V E Y K D -G Y K S W S -(60)
M + + K + + D
AcrIF18 M T -------T I K A A Y I S K -D ----------------------Q N W N -----D G -T ----T
uvig_74279_CDS_0124 P -A S V F N E A Y H R F G K M L F G E A V E A L K S G L A V R R -E -G W N D K G L C V V K Q V P S H I T G D I I P N (120)
+ VV+
AcrIF18 -T -----------------------------Y W F D V -N -G E T F G V V H G G E -S --------
uvig_74279_CDS_0124 M Q S L P Q S A K D I L M S R E N P H I D Y T N Q M L I I H -P D G R A D -S W V P S S S D I F A E D W E V I D E (177)
N ++ DG + + I + I E
AcrIF18 ----------------------W N -A K V V D C -D G A P S D Q Y T V D Q F N I ---T E D M I A E
uvig_74279_CDS_0124 5 AcrIIA4 0.50 View Alignment uvig_74279_CDS_0124 M D I N I -S N M K K -Y --I G L K V -V K A E P M T M T E A Q K V L G R E L K P A I A E V D G F L V E Y -K D G Y K (60)
M + + ++ DG
AcrIIA4 M -N I -N -D L I R E I K N K D Y T -V K L -S G T --------D ----S ---N S I T Q L I I R V N N D G N E
uvig_74279_CDS_0124 S W S P A S V F ---N -E A -Y H ---R F G K -M L F G E A V -E A L K S G L A V R R -E G W N D K G L C V V K Q V (120)
S + E +
AcrIIA4 Y V I S E S E N E S I V E K -F I S A F K N G W -N Q E Y E D E -E E F Y N D M Q T I T L K S E ------------
uvig_74279_CDS_0124 P S H I T G D I I P N M Q S L P Q S A K D I L M S R E N P H I D Y T N Q M L I I H P D G R A D S W V P S S S D I F A E D (180)
AcrIIA4 ------------------------------------------------------------
uvig_74279_CDS_0124 W E V I D E (186)
AcrIIA4 ----L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;