3D Structure for uvig_71851_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.42 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_71851_CDS_0009 1 AcrIE1 0.71 View Alignment uvig_71851_CDS_0009 M T K E Q E V -L -K -D -L K K V T L -E -E -L D E A I K A V D K Q E Q E E A I E Y F K K H I -K -Y -F E -E Q I (60)
M K A +
AcrIE1 M E K K ---L -S -D -A -Q ----V -A -L -V A A W R K ---------------Y -P -D -L -R E ---
uvig_71851_CDS_0009 K F I E A T D C D Y Y D E E L E L Y Q N R I K Q F N T I L S M -L -E -E K -D -K -E -I Q F Q N D -I N K T E L D R (120)
+ILS Q +
AcrIE1 ----------------S L E E A ----A S I L S L I -V -F -Q A -E -T -L S D -Q A N E L A N Y I R R Q
uvig_71851_CDS_0009 H K K T E K S L K G Q I I K Q N K M I D L M T E F I -E D E L T V D E F C T K E G C Y A D N Y I D G H C E K C L N C I K (180)
+ +I + +
AcrIE1 G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I ------R ---------------V ------
uvig_71851_CDS_0009 Q Y -F -E -N K A K E L L N K (196)
+ +
AcrIE1 --Y -G -D -A I D R D V -D
uvig_71851_CDS_0009 2 AcrIE6 0.62 View Alignment uvig_71851_CDS_0009 M T K E Q E V L K D L K K V T L E E L D E A I K A V D K Q E Q E E A I E Y F K K H I K Y F E E Q I K F I -E -A T D C D (60)
M+ ++EVL IK FE + +
AcrIE6 M N N D T E V L ---E --------Q Q -------------------I K A F E L L A D E L K -D -R ---
uvig_71851_CDS_0009 Y Y D E E L E L Y Q N R -I -K -Q F N T I L S M L E E K D K E I Q F Q N D I N K T E L D R H K K T E K S L K G Q I I K (120)
+ + T + Q++
AcrIE6 ------------L -P -T -----------L E I -L -------S P M Y T A V M V T Y D L I G K Q L A S
uvig_71851_CDS_0009 Q N K M -I D L M T E F I E D E L T V D E F C T K E G C Y A D -N Y I D G H C E K C L N C I K Q Y F E N K A K E L L N K (180)
I++ E + + D +K L
AcrIE6 R R A E L I E I L E E Q Y P G H A -A -----------D L --------------------S I K N -L C P
uvig_71851_CDS_0009 3 AcrIIA19 0.56 View Alignment uvig_71851_CDS_0009 M T K E Q E V L K -D -L -K K V T L E -E L D E -A I K A V D K Q E Q E E A I E Y F K K H I -K Y -F -E E Q I -K F (60)
M + + E + E I
AcrIIA19 M K L -I V ---E -V -E ----E -T N Y -K N -L V N ----Y T K L T N E S H N I L V N -R L -I S E Y I T --
uvig_71851_CDS_0009 I E A T D C D Y Y D E E L E -L Y Q N R I K Q F N -T I L S M L E E -K D K E -I Q F Q -N -D I N K T E L D R H K K T (120)
AcrIIA19 --------------K --------P Y E --------L ----R -L D L S -E R -------Y ----
uvig_71851_CDS_0009 E -K S L K G Q I I K -Q N K M I D L M T -E F I E D E L T V D E F C T K E G C -Y ---A D N Y I D G H C E K C L N C (180)
+ L I + ++ DE + + +
AcrIIA19 S N R D L I E F K F M L -I E Y C K E A L Q -D I K E L A N S D E A Y E T D E A F E A V F R -Q L F E E V I S N -P D T
uvig_71851_CDS_0009 I K Q Y F E N K A K E L L N -K (196)
+ F + L K
AcrIIA19 V L K A F H S Y T S F L E E N K
uvig_71851_CDS_0009 4 AcrIB9 0.55 View Alignment uvig_71851_CDS_0009 M T K E -Q E V L K D L K K V T L E -E L D E A -I -K A V D K Q E Q E E A I E Y F K K H I K Y F -E -E Q I K -F --(60)
M+K E K E ++ F H+K F
AcrIB9 M N K F A F E ---N -----D K Y -----L -E -R N I K A V V E K I A R D F N L H L K S K Y -S K D C -E F T V
uvig_71851_CDS_0009 I E A -T D C -D Y Y D E E L E L Y Q N R -I K ------Q F N T I L S M L E ---E K D -K E I Q -----F Q N D (120)
A D E + + Q I E + I F
AcrIB9 -V A D -N S F D N -I E N S T I F L E -I K R N D G K A C Q D H H I Y A E Y E C D E D D -N E Y I -A L T V K F Y G -
uvig_71851_CDS_0009 ------------------------I N K T E L D -R H -K K T E K S L K G Q I I -K Q -N K M -I D L M T (180)
+ + L + NK
AcrIB9 S S A S N Q I N T V Q G I K S S K Y A S C I V S D T D N Q L S K S -I H E L N L K K E K E Q Q E -A W N K -K E A E Y A
uvig_71851_CDS_0009 E F I E D E L T V D E F C T K E G -C Y A D N Y I D G H C E K C L N C I K Q Y F E N K A K E L L N K (230)
E Y + Y + K L
AcrIB9 R K K Q A Y -V S Q S Q R --E -K -Y E -----D I F D L -P F D F Y D Y I D K K E Q -G L -I
uvig_71851_CDS_0009 5 AcrIB2 0.55 View Alignment uvig_71851_CDS_0009 N /A (3)
N/A
AcrIB2 N /A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;