3D Structure for uvig_70510_CDS_0055 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.41 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_70510_CDS_0055 1 AcrIB1 0.71 View Alignment uvig_70510_CDS_0055 M I Q K -Q T -W -----------------------------------------K D -E -I R I L I (60)
M +K ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_70510_CDS_0055 T -D E E N L G S V Q I S I P -L Y ----V S -D -I F ------------------G -K A D A L I Y A L W V (120)
+ D E LG +I L + L+ L
AcrIB1 S E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
uvig_70510_CDS_0055 N V -V H -R -R N G V A K ----H L L -Q -L A E Q -Q -A K L N G V K T I G L E F V K D E S D R F V I D W Y L R S (180)
N + + L L VK I LE + +I +Y
AcrIB1 N Y S D D I -E N L I T G R E L L T F A -Y -D L F L -K -I K E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N F
uvig_70510_CDS_0055 G Y K P F N K ---K --S N L L I K K L D D (203)
G K + I L
AcrIB1 G F K M L E S L T S E E G L K V M I M E L -K
uvig_70510_CDS_0055 2 AcrVA5 0.71 View Alignment uvig_70510_CDS_0055 M I Q K Q T W K D E I R I L I T D E E N -L G S V Q I S I P L Y V S D I F G K A D A L I Y A L W V N V V H R R N G V A K (60)
M G + SI ++ I + V+ +R+G+
AcrVA5 M -K -I E L ---------S ---G -G Y I C Y S I --E ------E D E V T I D M V E V T -T -K R Q G I G S
uvig_70510_CDS_0055 H L L Q L A E Q Q A K L N G V K T I G L E F V --K D -E S D R F V I D W Y L R S G Y K P F N K -K S N -L L I K K L D (120)
L+ + A+ IGL D S +I++Y + L +
AcrVA5 Q L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L -M R -W -
uvig_70510_CDS_0055 D (121)
AcrVA5 S
uvig_70510_CDS_0055 3 AcrIF5 0.41 View Alignment uvig_70510_CDS_0055 M I Q K Q T W K D E -I R I L I T D E E N L G S V Q I S I P L Y V S D I F G K A D A L I Y A L W V N V V H R R N G V A K (60)
M + + + + + + + +
AcrIF5 M -S ----R -P T V V T V T E ---T P R -N ---P G -S Y E V N V E R D G K M V V G R A -R A G ----S D P G
uvig_70510_CDS_0055 H L L Q L A E Q Q A K L N G V K T I G L E F V K D E S D R F V I D W Y -L R S G Y K -P F N K K -S N L L I K K L D D (119)
++ A Q A G + + S L
AcrIF5 A A A A K A M Q M A M E W G S P N Y V I L G ----S ----N K V L A -F ----I -----P -E Q L R V -K -M
uvig_70510_CDS_0055 4 AcrIIA28 0.40 View Alignment uvig_70510_CDS_0055 M I Q K Q T W K D E I R I L I T D E E N L G S V Q --I S I P L Y V S D I F G K A D A L I Y A L W V N V V H R R N G V A (60)
M K + +
AcrIIA28 M -K T I F T K K Q T E E -L ---------L N D --------------------I -------S I E K Q
uvig_70510_CDS_0055 K H L L Q L A E Q Q A K L N G V K T I G L E F V K -D ----E S D R F V I D W Y L R S G Y K P F N K -K ----S N L (120)
K L + +K + + ++ +
AcrIIA28 K E L F N S M H D F R S Q -H A K E A R I P -G W S -D K Y N K L E K K M L S D F E E V T G I K Y D T L E S E L I W D N
uvig_70510_CDS_0055 L I -K K L -D -D (130)
L K L
AcrIIA28 L S N K F L Y -N S
uvig_70510_CDS_0055 5 AcrVIA2_new 0.39 View Alignment uvig_70510_CDS_0055 M I ---Q K Q T -W ---------K D E I R I L I T -D E E N -L G -S V Q -I S I P L Y V S D I F G K A D A L -(60)
M QK + K ++ + + D
AcrVIA2_new M K N I H Q K I Q L N K L Q V K T V Q N K G K D L L I N A P T G S G K T -E A S L L A -V S ----D -A -S K S --V
uvig_70510_CDS_0055 I Y A L -W V N V V H R R N G V A -K -H L -L -Q ----------------------------------(120)
L +V N +
AcrVIA2_new S -Y L L -P T V -V S T N V M -Y -L R -L -K -R D Y K L N L S V Q T S T K K E I S N F A E G V H I K L E C P D F A
uvig_70510_CDS_0055 -L -A -E -Q -Q -A K L N G V K T I G L E F V K --D E S -D R -F V I D W Y L R S G Y K P -F N K -------- (180)
+ K + TI + E + +
AcrVIA2_new L I D -F -I -K -T G K K T L G D T I I C D E F D H Y P E M V K -S A L M E Y K H T F S E T Q I I F V S A T L N K E S
uvig_70510_CDS_0055 ------------------------------------------------------------ (240)
AcrVIA2_new L M G I D L E E I A L D T E K N L I K Y K V Y P N D D F R M D D I I N N G K A Y G K K I G I I F N S I S Q L E C F I K P
uvig_70510_CDS_0055 ------------------------------------------------------------ (300)
AcrVIA2_new G E D F Y D D H F S K F K K G E N D Y I I H S Q V D D Y D K A L A E N A I V N N D F S V L I G T D S I S Y S I D V N F D
uvig_70510_CDS_0055 ---------------K -------------------------------------------- (360)
+
AcrVIA2_new I L I M M A S S E M A T N I Q R L G R C N R L N K H V T D Y N L Y F F G S Y L S D L K A P F I N E N V A F N N L E R I T
uvig_70510_CDS_0055 ------------------------------------------------------------ (420)
AcrVIA2_new S S H L C I S R K N I N E I K K E L P V S E I M E Y I E V K K H V L D E E E S L R P I P F K V R R G I E K E V V K F N A
uvig_70510_CDS_0055 ------------------------------------------------------------ (480)
AcrVIA2_new K G L K Q T K V I K T Y Q T F N M M D L K Y A F C E E Y Y Y D K K N S R A L D V I Q Q F D F E N D W F D R G D F T V K L
uvig_70510_CDS_0055 -----------------------------------------------------S -N -L L I (540)
+ ++
AcrVIA2_new Y N L K T E Q Q A L K Q L L L K L E E Y I E P E A P D E T D E D F Y Y R N P D I L L K Y T D Y D K L F I K G W T Y S I L
uvig_70510_CDS_0055 K K L -----D D (550)
AcrVIA2_new S I D G K T I Y I A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;