3D Structure for uvig_68949_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 81.79 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_68949_CDS_0008 1 AcrIE6 0.72 View Alignment uvig_68949_CDS_0008 M S T V E L R L N E L I D A C K N K M D E I R K L N E L E K A F L D -D -E -L E V -N H K E K -M F T R L K E I D K Y (60)
M++ L I A L + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A --D E L K D R L P T L -E I L -S -P M Y -T A V M -V T Y -D L I G K Q L --
uvig_68949_CDS_0008 D F E L L V L K Q I L K -T -----L E --Y V R T -G E Y T R R (94)
+ L IL +
AcrIE6 A S R R A E L I E I L E E -Q Y P G H --A A D L S -I K -N L C P
uvig_68949_CDS_0008 2 AcrIE1 0.64 View Alignment uvig_68949_CDS_0008 M S -T ---V E L R L N ---E -------L I D A C K N ----K M D E I R K L N E L E K A F L D D E L E V N H K (60)
M + + L ++ + + L++ + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q G L
uvig_68949_CDS_0008 E K M F T R L K E I D K Y D F E L L V L K Q I -L K T L E Y V R T G E Y -T R --R (102)
E + ID + + G+ R
AcrIE1 E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V Y G D A I D R D V D
uvig_68949_CDS_0008 3 AcrIC3 0.58 View Alignment uvig_68949_CDS_0008 M S -T V E L R L N ------E -L I D -A C K N K M -D ---E I R -K ---L N E -------L E K A F -L D D (60)
MS +V L + + E + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V -V A S S G Q V K F M A D K -T D R G L E S R F L V P E A G N R R I -E V
uvig_68949_CDS_0008 E L E V N H K E K M F T R L K E I D K Y D F E -L L V L K -Q -I L -K T L E Y V R T G E Y T R R (109)
L E E+ L +
AcrIC3 A L T G R D L E A A N A L F S E L A A S V E A T -N E M Y R -E -L D A -E R A Q I N -K A L E G
uvig_68949_CDS_0008 4 AcrIIC4 0.57 View Alignment uvig_68949_CDS_0008 M S -T --V E L R L --N -------E ----L I D -A C K N K M D E I R K L N E L E -K A F L D D E L E V N H -(60)
M T + + + K + F +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R -E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_68949_CDS_0008 K E K M F -T R L K E I D K Y -D F E L L V -L K -Q -I L -K -T L E -Y V R T G E Y T -R R (108)
L +
AcrIIC4 E K F N K E --------A V N E ----A -V E -K -L Q -K -A I D L --A E K Q G I Q F
uvig_68949_CDS_0008 5 AcrIF23 0.57 View Alignment uvig_68949_CDS_0008 M S T ---V E L R L N E ----L I D ------------------------A C K ----N --------(60)
M++ +
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I -D A R A V A K T
uvig_68949_CDS_0008 -------K M D E I R K L N -E ----L E K A F L D -D E --------L -E V N H ----K E K M F T R L K E (120)
+ D + E + E
AcrIF23 F G G R A L T G T A R Q K E W A E -K I R A E K V Q Q M N Q D Q A E M A C D P S G L L -T A A K F W I E N R N D S A Q E
uvig_68949_CDS_0008 I D K Y D F E L L V L K Q I L K T L -E -Y V R ----T ------G -E Y T ---R R (165)
I +L +++ T
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K -A A G Q A D K V A K I A A E Y -N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;