3D Structure for uvig_67542_CDS_0108 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.73 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_67542_CDS_0108 1 AcrVA5 0.78 View Alignment uvig_67542_CDS_0108 M S K I T V T G H T G R D I V F E S E Y G H C M I S Q E V E I I D A P S A L Y G Y E E Q D I V L V S D L H V R S E Y R R (60)
M + G S E D V + + V +R
AcrVA5 M K I E -L ------------S G G Y I C Y S I --E -------------E D E V T I D M V E V T -T -K R
uvig_67542_CDS_0108 K G H G R V L L R A A V A Y V K R K F P H L P L K I A A V P A F D G M S L E D L V D F Y A S E G F E T V E T -D P V V C (120)
G G L+ + ++ LP+ + A P D S EDL++FY S FE
AcrVA5 Q G I G S Q L I D M V K D V A R E -V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L
uvig_67542_CDS_0108 M E Y R G (125)
M
AcrVA5 M R -W S
uvig_67542_CDS_0108 2 AcrIB1 0.67 View Alignment uvig_67542_CDS_0108 M S K I T V T G H ---T --------------------------------------G --R D I V F E (60)
M ++ V
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_67542_CDS_0108 S -E ---Y G H C M I S Q E V E I I D A P S A ---L Y -G Y -E ---E --------------Q D I V L V S D (120)
S + G I + +I L + L+
AcrIB1 S E D N E I L G Y F T I A N R S L V I P -K E N F G I L -S K -T Q Q K K -L G N S A A I L K N G D L M T S S F L L G Q
uvig_67542_CDS_0108 L H V R S -E Y -R -R K G H G R ----V -L -L -R -A -A -V -A -Y -V K -R K F P H L P L K I A A V P A F D G (180)
L + GR +
AcrIB1 L G K N Y S D D I -E N L I T G R E L L T -F -A -Y -D -L -F -L -K -I K -E -L I N V K Y -I W L E C -Q -N -
uvig_67542_CDS_0108 M S L E D L V D F Y A S E G F E T V E T ---D -P V V C M E Y -R G (215)
L+ FY + GF +E+ + + M
AcrIB1 --E P K L I S F Y Q N F G F K M L E S L T S E E G L K V M I M E L K
uvig_67542_CDS_0108 3 AcrIF5 0.44 View Alignment uvig_67542_CDS_0108 M S K I T V T G H T G -R D I V F E S E Y G H C M I S Q E V E I I D A P S A L Y G Y E E -Q D I V L V S D L H V R S E Y (60)
MS+ + D V R
AcrIF5 M S R -------P T -V V T V T E T P R ----------N P G S Y E --V N V -E R D G K M V V G R A -R ---
uvig_67542_CDS_0108 R -R -K G H G R V L L R A A V A Y V K R K F P H L P L K I A A V P A F D G M S L -E D L V D F Y A S E G F E T V E T D (120)
+++ A + ++ ++ F
AcrIF5 -A -G -S D P G A A A A K A M Q M A M E W G -S P N Y V -I L G ---S ----N -K V L A F ---I -------P
uvig_67542_CDS_0108 P V V C M E Y R G (129)
+ +
AcrIF5 E Q L R -V -K M
uvig_67542_CDS_0108 4 AcrIIC3 0.44 View Alignment uvig_67542_CDS_0108 M S K -I T -V T -G H T G R D I V F E S E Y G H C M I -S Q E V E I I D A P S A L Y G Y E E Q D I V -L ---V S -D (60)
M K + +G + V +E + + + + + L
AcrIIC3 M F K R A I I -F T S F N G F E K V S R T E K R R L -A K I -I N A R V S I I D E Y L R -A K D T N A S L D G Q Y -R -
uvig_67542_CDS_0108 -L H V R S E Y R R K G H G R V L L R A A V A Y V K R K F P H L P L K I A A V P A F D G M -S L E D L V D F Y A S E G F (120)
+ L + A + + + + + + + DF A
AcrIIC3 A F L F N -D --E S P A M T E F L A K L K A F A E S C T -G I S I D A W E I E E S E Y V R L P V E R R D F L A A A N -
uvig_67542_CDS_0108 E T V E T D P V V C M E Y -R G (136)
AcrIIC3 -----G -K E I -F -K -I
uvig_67542_CDS_0108 5 AcrIF13 0.41 View Alignment uvig_67542_CDS_0108 M S K I T V T G -H T G R D I V F E S -E Y G H C M I S Q E V E I I D A P S A L Y G Y E E Q D I V L V S D L H V R S E -(60)
M +++ + + + ++ ++
AcrIF13 M K L L N I K -I -N E F A V T A N T E A G D E L Y L Q -L ---P H --------T P D S Q H S I N H E P ----L
uvig_67542_CDS_0108 Y R R K G H G R -V L L R A A V A Y V K R K F P H L P L K I -A A V -P A F D G -M S L E -D L V -D F Y -A -S -E G (120)
+ + K + + S G
AcrIF13 -D D D D -F V K -E V Q E I C D E Y F G K G --D R T L A R L S Y A G G Q A -Y D S Y T E -E D G V Y -T -T -N T G
uvig_67542_CDS_0108 F E T V E T --D P --V -V C M E -Y -R G (143)
VE
AcrIF13 D Q F V E H S Y A D Y Y N V E V Y C K A D L V
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;