3D Structure for uvig_65832_CDS_0058 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_65832_CDS_0058 1 AcrIIA27 0.72 View Alignment uvig_65832_CDS_0058 M K R Y V V E I -V --E -------K I T -Y K M E C S A V S P E C A E R F V R D V Y D S G V --L E G ---T G E (60)
MK + + + A + A + +R+ Y
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
uvig_65832_CDS_0058 L E S V S ----F D -V E E K K G E (79)
+++
AcrIIA27 I D N T H R R A W G R R Y L R V E E A
uvig_65832_CDS_0058 2 AcrIE2 0.65 View Alignment uvig_65832_CDS_0058 M K R Y V V E I V -------E K I T Y K M E C S -A -V S -P -E -C -A E -R -F V R D V Y D S G V L -----E (60)
M Y+++ E+ T A + + + V
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A V D I T -A -A A -K -S -A A -Q -Q I L G E E F E G L V Y R E T G E S
uvig_65832_CDS_0058 -G -T -G -E L E S V S ----F --D V E E K ---K ----G E (95)
++ E
AcrIE2 N -G -S -G M -F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
uvig_65832_CDS_0058 3 AcrIC9 0.61 View Alignment uvig_65832_CDS_0058 M K ----R Y V V E I V E K I T Y K M E C S A V S P E C A E R F V R D V Y D S G V L E G T G E L E S V S F D V E E K -(60)
M + + + ++R D +E
AcrIC9 M E T K M T S F Y K I T A Y -N S Q A L Y -F W G T D A D V D R Y -V D W L N R D R E I N V -------Y A A E A I P
uvig_65832_CDS_0058 -------------------K -------G E (89)
AcrIC9 E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
uvig_65832_CDS_0058 4 AcrIA 0.58 View Alignment uvig_65832_CDS_0058 M K ----R Y ---V V E ---------I V E K I T Y K -M E --C S ----A V ----------------(60)
M + + + +
AcrIA M V E V K Q K T L S Y K L K I N T R D Y S I T L E A -E L K A V I N V K G N D L V Y E D K Q Q K F V G Y I E T I S S Y E
uvig_65832_CDS_0058 ---S P -E -C A E -R F V R D V Y D S G V L E G T G E L -E S -V S -F D V E E -K -K G E (108)
A + + + + G + E + + E
AcrIA T K N A -K -E N A -D E I L N E R F E -K Y A N G L K -V L E -Q -T A E A I N A E -I E I E
uvig_65832_CDS_0058 5 AcrIE8 0.57 View Alignment uvig_65832_CDS_0058 M K R Y V V E I V E K I T Y K ---M -E C S A V S P E C A E R F V R D V Y D S G V L E G T G E L E S V -S F -D ---(60)
M + S FV + G ++
AcrIE8 M T T I T I N -T -Y D --P E A R -F N M S G E E A K E F F A F V E E Q A K V S ---G -F D V Y Y D S C T Y V D E E
uvig_65832_CDS_0058 V -E -E ----K -K G -E (75)
AcrIE8 -S -E R F V E K -C F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;