3D Structure for uvig_65554_CDS_0045 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.02 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_65554_CDS_0045 1 AcrIIA27 0.73 View Alignment uvig_65554_CDS_0045 M A K Y Y I D Y -T -I S -----Y -K -I D E V E K A I V E A N S L S A A K K A L K K D L K A E Y E G D F L K V E F (60)
M I ++ + VEA + A K ++ + K
AcrIIA27 M K T F N I I V S E S A N L K E H S S E -L -V D N I I Y K V E A K N R R E A F K K A R E E Y S -F S --S K W K F N M
uvig_65554_CDS_0045 -----N -D A Y R T ----S -D D -A R T N (85)
R +
AcrIIA27 R D L T A I D N T H R R A W G R -R Y L R V E E A
uvig_65554_CDS_0045 2 AcrIE2 0.66 View Alignment uvig_65554_CDS_0045 M A K Y Y I D Y T I S Y K I D E V E K -A I V E A N -S L S A A K K A L K K D L K A E Y E G D F L K V E F -------(60)
M Y ID + E+ V+A A+K + +F +
AcrIE2 M N T Y L I D P R K N N D N -S G E R F -T V D A V D I T A ----A A K S A A Q Q I L G E E F E G L V Y R E T G E S N
uvig_65554_CDS_0045 ----N D A -Y R ---T ---S D ---D ---A -R -T N (92)
A + T +
AcrIE2 G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M -E -L
uvig_65554_CDS_0045 3 AcrIC9 0.60 View Alignment uvig_65554_CDS_0045 M -A ---K Y -Y I D Y T I S Y K I D E V E K -A I V E A N S L S A A K K A L K K D L K A E Y E G D F L K -V E -F -(60)
M I + + L + E
AcrIC9 M E T K M T S F Y K I T -A Y ---N -S Q A L Y -F --W G T D A D V D -R Y V D W L N R D R E I N V Y A A E -A -I
uvig_65554_CDS_0045 ----------N -D A Y R -T ---S -D D -A -R T N (91)
D+ DD
AcrIC9 P E A E W A Q Y E G R D D V L -S G E E C G W D D F M S A E A
uvig_65554_CDS_0045 4 AcrIE8 0.55 View Alignment uvig_65554_CDS_0045 M A K Y Y I D Y T I S Y K I D E V E K A I V E A N S L S A A K K A L K K D L K A E Y -E G D F L K V -E F N D A Y R -T (60)
M I T D + + + +K+
AcrIE8 M T T I T I N -T Y ----D P E A R F N M S G E E A K E F F A F V E E Q A K V --S ---G F D -V Y Y D S C T Y V D
uvig_65554_CDS_0045 -------S D -D A R T -N (76)
+
AcrIE8 E E S E R F V E -K C F -Q N Y
uvig_65554_CDS_0045 5 AcrIA 0.53 View Alignment uvig_65554_CDS_0045 M A ---K Y ----Y I D --Y -T I S -Y K I D E -V E K A I --V E -A N S L S A A K K -A L K K D L K A E Y E G (60)
M+ + T E KA+ V +
AcrIA M V E V K Q K T L S Y K L -K I -N T R D Y S I T L E A E L K A V I N V K G N D L V ---Y E D -K Q Q K F V G Y I -E
uvig_65554_CDS_0045 D F L K V E F --------------------N D A ---Y -R ----T S D -D A R T N (109)
E N ++
AcrIA T I S S Y E -T K N A K E N A D E I L N E R F E K Y A N -G L K V L E -Q T A E A I N A E I E I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;