3D Structure for uvig_63212_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.68 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_63212_CDS_0027 1 AcrIE1 0.70 View Alignment uvig_63212_CDS_0027 M R G R P E F Y V R F M C P P -Y T A E D A E F L -A -E -R -N K -V L E E -A -V N R I A -A E N F E L R E D N R N (60)
M + + + + E+
AcrIE1 M -------E K -----K -L S D A ----Q -V -A -L -V A -A W R K -Y -P D L R E -S L E E A A S I L S L
uvig_63212_CDS_0027 L K E S Y R Y L S T T R I E E K K E L K E Q S E K S I L ---H R T T V G V T Q W V I Y W -L N A -A V K A G N W L I G (120)
+ + LS + E ++ Q + R+ + + G + G
AcrIE1 I V F Q A E T L S D Q A N E L A N Y I R R Q G -L E E A E G A C R N I D I M R A K W V E -V C G -E V N Q H G I R V Y G
uvig_63212_CDS_0027 N L L D D I D R F (129)
++D
AcrIE1 D A I D R D V -D
uvig_63212_CDS_0027 2 AcrIC3 0.57 View Alignment uvig_63212_CDS_0027 M R G R P E F Y V R F M C P P Y T A E D A E F L A E R N K V L E E A V N R I A A E N ---F E L R E -D N R N L K E -S (60)
M LE + ++A + + R E
AcrIC3 M -----S -------I Q V T S T ---N G R T V -N L E I E L G S V V A S S G Q V K F M A D K T D R G -L E S R
uvig_63212_CDS_0027 Y -R Y L S T -T R -I E E K K E L K -E Q S E K S I L H R T -T -V G -V -T Q W V I Y W -L N A A V K A ---G -N (120)
E + R + + A V A
AcrIC3 -F -L -V -P E -A -----G N -R -R I E V A L T G R -D -L E -A -A N A L F S -E L A -A S V E A T N E M Y R
uvig_63212_CDS_0027 W L I -G N L ----L -D D I D R F (139)
+ +
AcrIC3 -E L D -A E R A Q I -N K A L -E G
uvig_63212_CDS_0027 3 AcrIIA11 0.56 View Alignment uvig_63212_CDS_0027 M R G -R P -E F ----Y V -R F M ----C P P Y ----------T A -E D A E F L A E R N K V L E E A V N -R (60)
M Y +D LA R + ++
AcrIIA11 M A D M T L R -Q F C E R Y R K G D F L A K D R --E T Q I E A G W Y D W F -C D D -K A L A G R L A K I W G I L K G -
uvig_63212_CDS_0027 I A A E N F E L R E D N R N L K -E S Y R Y L S T -T R I E E K K --E L K E Q -S E K -S I L H R T -T ---V G V T (120)
I + + + R + ++ + L E
AcrIIA11 I --T S D Y I L D N Y R V W F K N N C P -M V G P L -Y D D V R F E P L D E E Q -R D E L Y F G V A I D D K R R E K -
uvig_63212_CDS_0027 -------------------------------Q ----W -----V -I -Y -W -L N A A V K A --- (180)
AcrIIA11 K Y V I F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A -R -E -K -K -R Q E M E E A N N
uvig_63212_CDS_0027 -G ----N -W L I G N L L D D I D R F (201)
+ +L +
AcrIIA11 K F A E I M -Q -R A D E I L W N L K E D
uvig_63212_CDS_0027 4 AcrIF23 0.56 View Alignment uvig_63212_CDS_0027 M R G R P E F ------Y V -----------------R F M -------C P P -------Y -------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P -V Q Q N G Q W I D L E T G I A Y D P S -Y N Y A A N T R R -A S L S P R G I D A R A V A K
uvig_63212_CDS_0027 --T A -E D A E F L A E R N K V L E E A V -N -R I A -A E N F E -L R E D N R N L K E S -Y -R -Y -L -S T T R I (120)
+ + E + I E + + +
AcrIF23 T F G -G R A ----L T G T A R Q K E W A E -K -I R A -E K V Q Q ----M N Q D Q A E M -A -C -D -P -S G L L
uvig_63212_CDS_0027 E E K K E L K E Q S E K S I L H R T T V G V T Q W V I Y W L N A A V K ----A G -----N -W -L I G -N -L -L -(180)
K E+ +G A + AG ++
AcrIF23 T A A K F W I E N R -N D S -A Q E I A G F V M Q Q K A L -L A Q H R S A K A A G Q A D K V -A -K I A -A -E -Y -N
uvig_63212_CDS_0027 D -D I -D R --F (190)
R F
AcrIF23 -A L -T A R W G F
uvig_63212_CDS_0027 5 AcrIIA19 0.54 View Alignment uvig_63212_CDS_0027 M R G R P E F Y V R F M C P P Y T A E D A E F L ----A E R N K ----V L E E A -V N R I A A E N F E L R E D -N -(60)
M+ + + E L +++ +L E +
AcrIIA19 M K -L ---I -V E V E -E T N Y K N L V N Y T K L T N E S H N I L V N R L I S E Y I T K P Y E L R L D L S E R Y S N
uvig_63212_CDS_0027 ---R N L K E S Y R Y L S T T R I -E E K K E L K E Q S E K S I L H R T T -V G V -T Q W V I Y W L N A A V K A G N W (120)
K + + KEL + E V Q ++ +
AcrIIA19 R D L I E F K F M L I E Y C K E A L Q -D I K E L A N S D E A Y E T D E A F E -A V F R Q L F E E V I S N P D T V L K -
uvig_63212_CDS_0027 L I -G N L L D D I D R -F (134)
+ + ++
AcrIIA19 A F H -S Y T S F L E E N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;