3D Structure for uvig_6300_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.74 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_6300_CDS_0037 1 AcrIE6 0.70 View Alignment uvig_6300_CDS_0037 M N E T V K I W L E D L I N K E I D -D V L D D I E S R K T W C -L E I ----S D K E A L Q I L L D R L C L D N E Y -(60)
M + LE I ++D++ R + ++ L
AcrIE6 M -N N D T E V L E Q Q I K A F E -L -L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_6300_CDS_0037 L D A L K T L K N R I E ----R E -D -L (82)
+++L
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
uvig_6300_CDS_0037 2 AcrIE1 0.64 View Alignment uvig_6300_CDS_0037 M N ---E -T V K I W L E -------------D ----L -I -N -K -E I D ----D V L D D I E S R K T W C (60)
M + + L + + + D + +
AcrIE1 M E K K L -S D A Q V A L V A A W R K Y P D L R E S L E E A A S -I -L -S -L I V -F Q A E T L S D Q A N E L A N Y I
uvig_6300_CDS_0037 L E I S D K E A L Q I L L D R L C L D N E Y L D A L K -T ---L K N R I E ----R E -D L (107)
E + + + + + R+
AcrIE1 R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_6300_CDS_0037 3 AcrIIC4 0.59 View Alignment uvig_6300_CDS_0037 M N E --T V K I ------------W ----L E D L I N K E I D D V L D D I E S R K T W C L -E I S D K E A L Q (60)
M + + + I +++ S + + E KE++
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
uvig_6300_CDS_0037 I L L -D R L C L D N E Y L D A L K T L K N R I E R E ---D L (92)
+ + NE ++ L + +E+
AcrIIC4 K F N K E ---A V N E A V E K L Q K A I D L A E K Q G I Q -F
uvig_6300_CDS_0037 4 AcrIF23 0.53 View Alignment uvig_6300_CDS_0037 M N E --T V K I W L ---E D L I -N ----------------------------------------(60)
M+ T +
AcrIF23 M T N F Q T W L D S A D I P V Q Q -N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_6300_CDS_0037 ---------------------K -E -I -D --------D V -L D D I E S R K T W C L E -I S D K E A L (120)
+ + D T
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A -E -K -V -Q Q M N Q D Q A E -M A C D P S G L L T A A K -F -W I E N R -
uvig_6300_CDS_0037 Q -I -L L D R L C L D N E Y L D A L K -------T -L -----K -N ----R -I -E R -E ----D -L (177)
+ + + AL
AcrIF23 N D -S -A Q E I A G F V M Q Q K A L L A Q H R S A K A A -G Q A D K -V A K I A A -E -Y -N A -L T A R W G F
uvig_6300_CDS_0037 5 AcrIF25 0.53 View Alignment uvig_6300_CDS_0037 M N E ---T V K I --------W L E ----D ----------------L I N ----K E I D -------(60)
M + + + I
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V -K E S R L E G M K L T D W I T G R V -E A K A L S I A E V L E E A A
uvig_6300_CDS_0037 D V L --------D D ------------I E S R K T W C L E I S -----------D K E A L Q I L -L --(120)
+ I + ++ +E Q+
AcrIF25 A M A R S L E D S P I F -Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L -L S S G
uvig_6300_CDS_0037 --D ------------R ----------L -C L D N E Y L D A L K T L K N R I E R E -D L (171)
D + ++ + + +E
AcrIF25 L P D S Y S G A V P N E G R T G W V T A S Q M A R L -F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;