3D Structure for uvig_60737_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_60737_CDS_0003 1 AcrIB1 0.82 View Alignment uvig_60737_CDS_0003 M D E I K I D --L -N N C C M E V V S E E S A S I F S G F T --S -G S P E I D R Y F R E V A A S -D --P R N V C Y (60)
M+ + N E + F +I+ +E A+ + + Y
AcrIB1 M E S K N L R K L -L N E Y E E I D -I N E M L K N F R S I K N S -G T K N D I E I F L H E K A I K F E K S S I S S T Y
uvig_60737_CDS_0003 A F Y N Q K N G D V I G L A A L C C S G I N L N D -A -K L ------V -------------E -L I P S I K I D (120)
+ + +++G + + + + S +
AcrIB1 V V F S -E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D -L M T S S F L L G
uvig_60737_CDS_0003 Y F A V S E K Y Q D I E L S G S -D D P E E R Y F V S D A F L S F L I K E I R E I T E S Y L G A T H I V L Y S -V -P D (180)
+ + L+F+ I + + I L P
AcrIB1 Q L G K N Y S D --D -I ---E -----N L I T G R E L L T F A Y D L F L K I K -E L I N V K Y I W L E C Q N E P K
uvig_60737_CDS_0003 A V H F Y E R N L F G D F E E F M K P E Q Y R Y L D G C K P M Y M A -L (216)
++ FY F E +G K M M
AcrIB1 L I S F Y Q N F G F K M L E S L -T ----S -E E G L K V M I M E L K
uvig_60737_CDS_0003 2 AcrVA5 0.58 View Alignment uvig_60737_CDS_0003 M D E I K I D L N N C C -M E -V V S E E S A S I F S G F T S G S P E I D R Y F R E V A A S D P R N V C Y A F Y N Q K N (60)
M I + + +
AcrVA5 M -K I E L --S G G Y I C -Y S I ------------E ------------------E ----------
uvig_60737_CDS_0003 G D V I G L A A L C C S G I N L N D A K L V E L I P S I K I D Y F A V S E K Y Q D I E L S G S D D P E E R Y F V S D A F (120)
+ ID V+ R +
AcrVA5 -------------------------D E V T I D M V E V T -------------T -K R Q G I G S Q L
uvig_60737_CDS_0003 L S F L I K E I R E I T E S Y L G A T H I V L Y S --------V -P -D A V H F Y E R N L F G D F E E F M K P E Q Y (180)
+ + +RE G I LY D++ FY N F +
AcrVA5 I D M V K D V A R E -V ----G -L P I G L Y A Y P Q D D S I S -Q -E D L I E F Y F S N D F E Y D P D ---D ---
uvig_60737_CDS_0003 R Y L -D G C K P M Y M A L (194)
+ M
AcrVA5 ---V -D G R L M R W -S
uvig_60737_CDS_0003 3 AcrIC11 0.42 View Alignment uvig_60737_CDS_0003 M D E I K I D L N N C C M E -V V S E -E S A S I F S G -F -----T -S -G S P E I D R Y F R E V A A S D P R -N V (60)
M ++ VV E + S F G + +A +
AcrIC11 M N K E T Q -I T --A S -A V V G E D K R L E F L S K H F G V R F A -R -R G E A L V F A W L L R L A K V P I E W T R
uvig_60737_CDS_0003 C Y A F Y N Q K N G D -V I G L A A L C -C S G I N L N D A K L V E L -I P S I K I D Y F A V S ----E K Y Q D I E L (120)
+ + ++ + + +
AcrIC11 L Q Y Y T L S N -S G F Y L A -P ---R -E L -R I S -E C E L -S A D A V G I V A T M L T L R Q L A H E S A A C V E
uvig_60737_CDS_0003 S G S D D P E E R -Y -------F -V -S -D -A -F L S F L I K E I R E I T E S -Y L G A T H I V L Y S V P D A V (180)
+ + + S
AcrIC11 A -----D S -T -Y P A A K L A V T -A -S -V -K -F A Q Q Y H H L A A ----Y ----------S -V ---
uvig_60737_CDS_0003 H F Y E R N L F G D F E E F M K P E Q Y R Y L D G C K P M Y M A -L (214)
+ Y A
AcrIC11 K ---------------H ------A E S I N I Y R A I D
uvig_60737_CDS_0003 4 AcrIA1 0.41 View Alignment uvig_60737_CDS_0003 M D E I K -I -D --L -N N C C -------------------------------------------(60)
M N
AcrIA1 M R S K M I K K -E E K D N K I Y I T V K D E E T G I E W T A V V E K V E F E W C V K Q K E E L E V E D A E K S V M L D
uvig_60737_CDS_0003 ---M --E V V S E E S A S I -F S G -F T S ----G S P E I D R Y F R E -V A A S ---------------- (120)
++ +A + T + + ++S
AcrIA1 Y A L F G N C A I P K V T A E E Y K N -S L T K Y T G E K M S R L L H I L Y N Y E I V S Q N D T K N I W V T E L S R C L
uvig_60737_CDS_0003 ---------D ----------------------------P -R -N V C Y A F -Y N -Q K N G D V I G (180)
++G
AcrIA1 R R S Y L M R K E G K T K V G L N E A M K M H I G S G L H M R L Q S L L R K H G -F E T E V R V Q R K T A L G F Q I V G
uvig_60737_CDS_0003 L A A -L C C S G I N L N D A K L V E L I P S I K I D Y F A V S E -K -Y Q D I E L S G S D D P E E R Y F V S D -A F L (240)
+ I + ++
AcrIA1 R I D V Y D K -----E ------E -N V I Y E --L K Y T H N D K ---L D S ----------V R -L N N -Y
uvig_60737_CDS_0003 S -F L I K E I R E I -T E S Y L G A T H I V L Y -S -V P D A V H F Y E R -N L F G D F -E E F M -K P E Q Y R Y --(300)
+ E A + L + V
AcrIA1 L R -Q L N Y Y I E M A -----N A M K G Y L V I V H A D G S V E E I K -R D W A ---E -T -D L E -K R A N A F G
uvig_60737_CDS_0003 --L --D G ---------------C ----K P M Y -M -A L (336)
+ L
AcrIA1 I Y -V E E N T L P P K K S R P D A E C I E -C P F Y N F -C W -G K L
uvig_60737_CDS_0003 5 AcrVA4 0.41 View Alignment uvig_60737_CDS_0003 M D E I -K -I ---D --L -N N C C -------------------------M E V V S E ----E -S -A (60)
M K V
AcrVA4 M Y -E I K L N D T L I H Q T D D R V N A F V A Y R Y L L R R G D L P K C E N I A R M Y Y D G K V I K T D V I -D -H -
uvig_60737_CDS_0003 -S -I -F S G ----F -T S G -S P E I D R Y F R E V A A -S ------------------D -----P R N (120)
S + I E+ + + P
AcrVA4 D -S -V H S -D E Q A -K V -S N N D I I K M A I S E L G V N N F K S L I K K Q G Y P F S N G H I N S W F T D D P V K
uvig_60737_CDS_0003 V C Y A F -Y N Q ---K N ----------------G -D -V -I G L A A L C C S G I -N L N D A K L V -E -L (180)
N ++
AcrVA4 S -K T -M H N D E M Y L V V Q A L I R A C I I K E I D L Y T E -Q -L Y N I I K S ---L P Y --------D -K -
uvig_60737_CDS_0003 I P S -I -K -I D Y F A V -S E K Y Q D I E L S G S D D P E E R Y F V S D -A F L -S F L -I K -E I R E I T E S Y L (240)
P + D + D L E + +
AcrVA4 R P -N V V -Y S D Q P L -D P N N L -D --L ------S E ----P E L -W -A E Q -V -G E C -M R Y A ---H
uvig_60737_CDS_0003 G A T H -I V L Y S V P D A V H -F Y E R N L F G D F E E F -M --K P E Q Y R Y L D G C ---K -P M Y M A -L (297)
+ + S + N ++ +
AcrVA4 N D Q P C F Y I G S T K ---R E -L R V N Y I ---V P V I -G V ---R -D E I E R V M T L E E -V R N L H K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;