3D Structure for uvig_596118_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.50 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_596118_CDS_0006 1 AcrVA5 0.72 View Alignment uvig_596118_CDS_0006 M T Q R Q I W K D E I R I L I T D E Q N Y G S V Q V S I P C Y N S K I S G K A D A L I Y A L Y V D T A C R K Q G V A T K (60)
M + G + SI ++ I + V ++QG+ +
AcrVA5 M -K I -E L --------S -G ---G Y I C Y S I -E -------E D E V T I D M V E V T -T -K R Q G I G S Q
uvig_596118_CDS_0006 L L Q S A E H Q A K L N G V Q V I C L E F D --K -E E S E S F V L N W Y L K N G Y K P F S K -R -S K -L L I K Q L E (120)
L+ + A+ I L S ++ +Y N L +
AcrVA5 L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D -G R L -M R -W -
uvig_596118_CDS_0006 D (121)
AcrVA5 S
uvig_596118_CDS_0006 2 AcrIB1 0.68 View Alignment uvig_596118_CDS_0006 M T Q R Q I -W ------------------------------------------K D -E -I R I L I (60)
M ++++ ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_596118_CDS_0006 T -D E Q N Y G S V Q V S I P C -Y -----N S K ----I -S ---------------G K A D A L I Y A L Y V (120)
+ D G ++ + L+ L
AcrIB1 S E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
uvig_596118_CDS_0006 D T -A -C R K Q G V ----A -T -K L L -Q -S A E H -Q A K L N G V Q V I C L E F D K E E S E S F V L N W Y L K N (180)
+ L V I LE E ++++Y
AcrIB1 N Y S D D I E N L I T G R E L -L -T F A -Y -D L F L -K I K E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N F
uvig_596118_CDS_0006 G Y K P F S K ---R --S K L L I K Q L E D (203)
G K K+ I L
AcrIB1 G F K M L E S L T S E E G L K V M I M E L -K
uvig_596118_CDS_0006 3 AcrIF5 0.42 View Alignment uvig_596118_CDS_0006 M T Q R Q I W K D -E I R I L I T D E Q N Y G S V Q V S I P C Y N -S K I S G K A D A L I Y A L Y V D T A C R K Q G V A (60)
M+ + + + + +
AcrIF5 M S -----R -P T V V T V T E T P R ----N ---P G S -Y E -V N V E R D G K M V V G R A -R A G ----S D P
uvig_596118_CDS_0006 T K L L Q S A E H Q A K L N G V Q V I C L E F D K E E S E S F V L N W Y -L K N G Y K P F S K R S K L L I K Q L E D (118)
++ A A G + S + L
AcrIF5 G A A A A K A M Q M A M E W G S P N Y V I L G ----S -N ---K V L A -F I -----P ---E Q L R V -K -M
uvig_596118_CDS_0006 4 AcrVIA1_Lse 0.40 View Alignment uvig_596118_CDS_0006 M T Q --R -Q I -----W ------K ---D --------E -I R I L I T --D E Q N Y -G S V Q V S I P -C (60)
M + K + + + + Y
AcrVIA1_Lse M I Y Y I K D L K V K G K I -F E N L M N K E A V E G L I T F L K K -A E F E I Y S R E N Y S K Y N K W F E M W K S P -
uvig_596118_CDS_0006 Y -N S K I S G K A D A L I Y A -L -Y -V -D T A C R K Q G ----V A T -K L L ----Q -------------(120)
S + K L G V +
AcrVIA1_Lse T S -S L V F W K N Y S F R C H L L F V I -E K -D G E C L G I P A S V F -E S V -L Q I Y L A D P F A P D T K E L F V
uvig_596118_CDS_0006 S A E H Q A K L N -G V Q V I C L -E F -D ---K ----E E S E S -------------------F V L N W Y (180)
+ + F +E+ L
AcrVIA1_Lse E V C N L Y E C -L A D V T -V V E H F E A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I
uvig_596118_CDS_0006 L K ------------N ----G Y -K P F S K R ----------------S K -------L L ----I (240)
+ +
AcrVIA1_Lse A T N K K S Q K Y N Q I Q G K I Q E I N -K -E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L -
uvig_596118_CDS_0006 -K Q -L E D (247)
AcrVIA1_Lse K E -E -L N
uvig_596118_CDS_0006 5 AcrVIA2_new 0.40 View Alignment uvig_596118_CDS_0006 M T ---Q R Q I W ---------K -D E --------------------------I R I L I T D ----(60)
M Q+ + L+
AcrVIA2_new M K N I H Q K I Q L N K L Q V K T V Q N K G K D L L I N A P T G S G K T E A S L L A V S D A S K S V S Y L L P T V V S T
uvig_596118_CDS_0006 -------E Q N Y G ----S V ----------------Q V S -I P C --Y N S K I S ----G K A D -A L (120)
Y + D ++
AcrVIA2_new N V M Y L R L K R D Y K L N L S V Q T S T K K E I S N F A E G V H I K L E C P D F A L I D F I K -T G K K T L G D T I I
uvig_596118_CDS_0006 I Y A L Y V D T A C R K Q G V A T K L L Q S A E H Q A K L N G V Q V I C L -E F D -----K -------------(180)
+ + + + + I
AcrVIA2_new C D E F D H ----Y ----P E M V K S A L M E Y K H T F S E T Q I I F V S A T L N K E S L M G I D L E E I A L D T E
uvig_596118_CDS_0006 --------E -E ---S E S --------------------F -V -L -N -W Y L K ----------- (240)
+
AcrVIA2_new K N L I K Y K V Y P N D D F R M D D I I N N G K A Y G K K I G I I F N S I S Q -L -E -C F I K P G E D F Y D D H F S K
uvig_596118_CDS_0006 ---------------------N -------G Y -K -P F ------S -----K ----------- (300)
AcrVIA2_new F K K G E N D Y I I H S Q V D D Y D K A L A E N A I V N N D -F -S V L I G T D S I -S Y S I D V N F D I L I M M A S S
uvig_596118_CDS_0006 --------R --------------------------------------------------- (360)
AcrVIA2_new E M A T N I Q R L G R C N R L N K H V T D Y N L Y F F G S Y L S D L K A P F I N E N V A F N N L E R I T S S H L C I S R
uvig_596118_CDS_0006 ------------------------------------------------------------ (420)
AcrVIA2_new K N I N E I K K E L P V S E I M E Y I E V K K H V L D E E E S L R P I P F K V R R G I E K E V V K F N A K G L K Q T K V
uvig_596118_CDS_0006 ------------------------------------------------------------ (480)
AcrVIA2_new I K T Y Q T F N M M D L K Y A F C E E Y Y Y D K K N S R A L D V I Q Q F D F E N D W F D R G D F T V K L Y N L K T E Q Q
uvig_596118_CDS_0006 ----------------------------------------------S -K -L L I K Q -L --- (540)
++
AcrVIA2_new A L K Q L L L K L E E Y I E P E A P D E T D E D F Y Y R N P D I L L K Y T D Y D K L F I K G W T -Y S I L S I D G K T I
uvig_596118_CDS_0006 -E D (543)
AcrVIA2_new Y I A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;