3D Structure for uvig_596118_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 84.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_596118_CDS_0004 1 AcrIF15 0.84 View Alignment uvig_596118_CDS_0004 M T K M N V ---T -E -K D F E A F F Q A T E S -----L M A ---M -S G T L -D E G -F D E E A -Y A I N R Q F (60)
MT ++ E + ES + T+ F +
AcrIF15 M T T I T I A Y E V S -N D K V E T I K T M V E S Q Q I H N V N -F N G E E F -T I E R G -D F T S -I D K -D E A E H
uvig_596118_CDS_0004 K S -F K R R Y L K A K K D N Q (76)
+ + + +
AcrIF15 V K L -L N K I Q D I I H G Y S
uvig_596118_CDS_0004 2 AcrIE8 0.84 View Alignment uvig_596118_CDS_0004 M T K M N -V ------T E -K D F E A F F Q -A T E S L M A M S G T L D E G --F -D E E A Y A -I N R Q F K S F K (60)
MT + E + +
AcrIE8 M T T I T I N T Y D P E A R F N M S G E E A K -E F F A F V E E Q A K V S G -F D V -Y Y D S C T Y V -D E E ---S E
uvig_596118_CDS_0004 R R Y L K A K K D N Q (71)
R K N
AcrIE8 R F V E K C -F Q N Y
uvig_596118_CDS_0004 3 AcrIC5 0.84 View Alignment uvig_596118_CDS_0004 M T K M N V -----T E --------K D -F E -A F -F Q -A T E S L M A M S G T L D -E G F D E E A Y A I N R Q (60)
M+K ++ + A D E + A
AcrIC5 M S K V T L N G Q Q I D F D A A V N L M D A E L -R E E -L -H S A -Q E W T -----N D Q ----E F L D A Y V Q A
uvig_596118_CDS_0004 F K S F K R -R Y -L -K A K -K --D -N Q (83)
+
AcrIC5 ----H A A -K F -D -G -E E F Q -V -A
uvig_596118_CDS_0004 4 AcrIIA28 0.83 View Alignment uvig_596118_CDS_0004 M T K M --N -V ----T E -----K D F E A F F Q A T E S L M A ---M S G T -------L --------D E (60)
M F+
AcrIIA28 M K T I F T K K -Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A -R I P G W S D K Y N K L E K K M L S
uvig_596118_CDS_0004 G -F D E E A Y A I N R Q F -K S F K R R ---Y L K A --K K -D --N Q (98)
F+E + + N+
AcrIIA28 -D F E E V T G I K Y D T L E S -E L I -W D N ----L S -N K F L Y N S
uvig_596118_CDS_0004 5 AcrIF2-IC2 0.83 View Alignment uvig_596118_CDS_0004 M -T -K M N V -------T E ---K D --------F ---------E A F -F Q ---------A T E --(60)
M T + T
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E -A A E A I A I A -K D Q V W D G E G Y T K Y T -F D D N S V L I Q S G -T T
uvig_596118_CDS_0004 --S -L M A -M S -G T -L D E G F D E E A Y A I N -R -Q -F -K -S F K -R -R Y L K A K K D N Q (112)
+ D + +
AcrIF2-IC2 Q Y A M D A -D D -A D -S I K G Y A D W L D D E A R S -A -E -A -S E I -E -R L L E S -V E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;