3D Structure for uvig_595855_CDS_0044 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.39 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_595855_CDS_0044 1 AcrIE6 0.72 View Alignment uvig_595855_CDS_0044 M I V A H K E L A I L K R K A N K L R K E I G E V K Q A H R R -N E F -------A R -V -N T Y Q L F S M E H R L K (60)
M L + L E+ + + QL S L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y -D -L I G K Q L A S R R A E L I
uvig_595855_CDS_0044 -W L E E M I K ----H K -E K --H -G (82)
LEE
AcrIE6 E I L E E Q Y P G H A A D -L S I K N L C P
uvig_595855_CDS_0044 2 AcrIF23 0.62 View Alignment uvig_595855_CDS_0044 M I V -A ------------H K E ---L A I L K --------------------------R -----(60)
M L R
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L -E T -G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_595855_CDS_0044 --------------K A N K L R K E I G E -V K Q ----A H R R -N E ----F ---A R -V -------N (120)
A K+R E +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M -N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E -
uvig_595855_CDS_0044 -T ----Y Q L F S M E ------------H -R L -K -W L E E M I K H K E K H --G (167)
Q + + +
AcrIF23 I -A G F V M Q Q K A L L A Q H R S A K A A G Q A -D K -V -A K I A A E Y N A L T A R W G F
uvig_595855_CDS_0044 3 AcrIE1 0.60 View Alignment uvig_595855_CDS_0044 M I -V A ---H ----K -E -L -------A -I -L -K -R -----------K A N K L R K E I G E V K Q A (60)
M + A L + E+ +
AcrIE1 M E K K L S D A Q V A L V -A -A -W R K Y P D L R E -S -L -E -E A A S I L S L I V F Q A E T L S D Q A N E L A N Y
uvig_595855_CDS_0044 H R R N E F ---A R -V -N T Y Q L F S M E H R L K W L E E M I -K H K ------E -K -H --G (111)
RR+ A ++ M + + + H +
AcrIE1 I R R Q -G L E E A -E -G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
uvig_595855_CDS_0044 4 AcrIIC4 0.58 View Alignment uvig_595855_CDS_0044 M I V A -H K --------E L A ---I L K R ----K ----A N K L R K E I G E V K Q A H R R N E F -A R V N T (60)
M + A +L + + ++ + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
uvig_595855_CDS_0044 Y Q L -F -S -M -E H R -L -K W L E E M I K H K E K ---H G (93)
L I EK
AcrIIC4 K F N K -E -A -V N E -A -V E K L Q K A I D L A E K Q G I Q F
uvig_595855_CDS_0044 5 AcrIF2-IC2 0.53 View Alignment uvig_595855_CDS_0044 M -I V A -H K E ----L A I L -K -R -K A -N K -L R ----K E I -G ---E V -K Q A H R ---R -N E -F -(60)
M + +
AcrIF2-IC2 M A T K T A Q -M I A Q Q H K D -T -V -A A -C -E A -A E A I A I A -K D Q V W D -G -E G Y T K Y T -F D D N S V
uvig_595855_CDS_0044 -------A R -V ----N T Y Q L F S M E H R L K -W L -E ---------E -M -I -K -H -K -E -K -H G (120)
++ L
AcrIF2-IC2 L I Q S G T T Q Y A -M D A D D A D S I K G Y A D W L D D -E A -R S A E A S E I E -R -L -L -E -S -V -E -E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;