3D Structure for uvig_595417_CDS_0084 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 90.17 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_595417_CDS_0084 1 AcrIIA30 0.75 View Alignment uvig_595417_CDS_0084 M S V K N K T A A I W -D K A -N -T T -R I A L K L Q N R T D A D I L A K L E S V -G N K -Q G Y I K E L I R Q D I A (60)
M A R + KE I IA
AcrIIA30 M I -----T A N E I -V K T -H K -G -------I R ---L V Q ----R K N E -S W E E -F K E R I Q E V I A
uvig_595417_CDS_0084 R T T S K D K E -D -K N M T K V I N A N G T E I D Y N A A V A L M D D -D I C A E L N D K -I A P C T E Q A F F S A -(120)
++ K I + +
AcrIIA30 K Q G D N Y L T Q -T K P V H E -I K ---N -------------K ---------G --------T R N -I
uvig_595417_CDS_0084 Y -E -Q A H A D K Y -G E E W E L S K A N P C Y (145)
Y
AcrIIA30 -R -R ----T -Y V -N I L L -K --E -G A
uvig_595417_CDS_0084 2 AcrIE9 0.73 View Alignment uvig_595417_CDS_0084 M S V K N K T A A I W D K A N T T R I A L K L Q -N R T D A D I L A K -L E S V G N K Q G Y I K E L I R Q D I A R T T S (60)
M + I +
AcrIE9 M --------------E -M Q -I -N -S ----R K ----L ---------------G R T I T F S --
uvig_595417_CDS_0084 K D K E -D K N M -T K V -I N A --N G -T E I D Y N A A V A L M -D -D D I C A E L N D K I -A P C T E Q A F F S A (120)
+ + + + ++
AcrIE9 -R P -G --A -S -Y I F A D L N G K S G -T L G C Q I -C --S G -G G T M G S T -L S Y -D G -D --------
uvig_595417_CDS_0084 Y E Q A -H A D K Y G E E W E L S K A N P C Y (143)
+
AcrIE9 D Q A Q F -E A I C R R W Y R A H V R -G -E
uvig_595417_CDS_0084 3 AcrIF17 0.73 View Alignment uvig_595417_CDS_0084 M S V K N K T A A I W D K A N T T R I A L K L -Q N R T D A D I L A K L E S V -G -N K Q G Y I K E L I R Q D I A R --(60)
M +K + IK + R
AcrIF17 M -------------F ---S E I K -F -S S ---------L -S D -H A L A E L I K M A M E E F Q Q R L I
uvig_595417_CDS_0084 -T -T S K D ---K E D K N M T K V I -N A N G T E -I D Y N A A V A L M D D D I C A E L N D K I A P -----C -- (120)
+ + D + +N +
AcrIF17 K P G V N T I K T V D -V E --P V -V L -----H A ---------P S D N E M V F I N N C L K K R R A G E Y I H
uvig_595417_CDS_0084 --T E -Q ----A F F S A Y E Q A H A D K -Y G E E --------W E L -S -K A N P C Y (168)
Y Q K Y ++
AcrIF17 A S M -K -D K Y R D L T R K Y P Q W F S V K A Y P D D L R G S V S K H Y V -D Y F T -K -K E
uvig_595417_CDS_0084 4 AcrIIA34 0.73 View Alignment uvig_595417_CDS_0084 M S V K N K -T A A I W D K A -N --T T R I A L K L Q -N -R T D -A -D I -L A K L E S V G N K Q G Y I K E L I R Q (60)
M + + + A ++ + + + + +
AcrIIA34 M K -N I A N E -I K T I R Y A F E D G R S ----T -Q -K -S I M -R K -I K A L T D Q F E T M -D D L I D S L N S
uvig_595417_CDS_0084 D I A R ----T T S K D K -E D -K N M T K V I N A N G T E I D Y N A A V A L M D D D -I C A E L N D K I A P C T E Q (120)
+ + N + L + T
AcrIIA34 Y A D T H Y T W -A I T Y F Q -L A R I I I S F Q A S N N -T T S E K -K I D L Q S G -P -I E V N G K L K I R V T V D
uvig_595417_CDS_0084 A F F S A Y E Q A H A D K Y -G -E E W -E L -S K A N P C Y (151)
F ++ + K
AcrIIA34 E F M A D L -A N W -E H -L -E -D I K -K L A K -E -L A
uvig_595417_CDS_0084 5 AcrIE5 0.71 View Alignment uvig_595417_CDS_0084 M S V K N K T A A I W D K A N T T R I A L K L Q N R T D A -D I L A K L -E -S V G N K Q G Y I K E L I R Q D I A R T T (60)
M I+ + G+ + + A
AcrIE5 M --S -------------N D ----R ----N G -I I N Q I I -D Y T G T D R D H A E R I Y E E L R A D D -
uvig_595417_CDS_0084 S K D K E D K N M T K V I N A N G -T E I D Y N A A V -A L M -D D D I C A E L N D K I A P C T E Q A F F S A Y E Q A H (120)
V +D + + +
AcrIE5 R I Y ----F D D S V -----G --L D R -Q G L L -I R E ----------D ---------------V -
uvig_595417_CDS_0084 A D K -Y G E E W E L -S K A N P -C Y (140)
+
AcrIE5 --D L -M ----A V A A -E -I -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;