3D Structure for uvig_595114_CDS_0161 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.72 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_595114_CDS_0161 1 AcrIIC4 0.64 View Alignment uvig_595114_CDS_0161 M K E L K T L Y K I I Y D D L K D S D M -L I G Y A K E L K -E T N K P L A D M Y M A D A K S R L A H -S -Q V -M H -(60)
MK + + S+ L +K
AcrIIC4 M K I T S S N F A ---T I A T -S E -N ----F A K L -S V -L P K ---N H R E P I K G ----L -F K -S A -V
uvig_595114_CDS_0161 K E F T G I V E K M K G E S R G ----T E I A D C L W E E T H N H Y -M E W -Y E -D -L -E N -C I K K W (115)
F+ + + K E+ + E + E +
AcrIIC4 E Q F S S A R D F F K N E N Y S K E L A E K F N K E A V N E A V E K -L Q K -A I -D -L -A E -K Q G I Q F
uvig_595114_CDS_0161 2 AcrIE6 0.63 View Alignment uvig_595114_CDS_0161 M K E -L K T L Y K I I Y D D L K D S -D M L I G Y A K E L K E T N K P L A D M Y M A D A K S R L A H S -Q V -M -H -(60)
M L +K L+ +K+ T L +
AcrIE6 M N N D T E V L E Q Q ----I K A F E -L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D L I G -K Q -L -A
uvig_595114_CDS_0161 K E -F -T -G I -V E K -M K G E S R G T E I A D C L -W E E T H N H Y M E W Y E D L E N C I K K W (111)
G + + +
AcrIE6 -S R -R -A -E L -I E I L E E Q Y P G H -A ----A --D L ----------S I K N L -C P
uvig_595114_CDS_0161 3 AcrIE1 0.55 View Alignment uvig_595114_CDS_0161 M -K ---E -L -K -T L Y K -I ----------I Y D -D L K D S D M L I G Y A K E L K E T N K P L A D M Y M A (60)
M K + + + + + ++ A L + A
AcrIE1 M E K K L S D A -Q -V -A L V A A W R K Y P D L R E S L E -E A A S I L S L I V F Q A E T L S D ----Q A N E L A N
uvig_595114_CDS_0161 D A -K -S -R -L -A H S Q V M H K E F T G I V E K M K G E S R G T E I A D C L W E E T H N H Y M E W Y E -D L E N C (120)
+ + K + E +H Y +
AcrIE1 Y I R -R -Q -G -L E E A E G A C R N I D I M R A K W ------V ----E V C G E V N Q H G I R V Y G D -A I D R
uvig_595114_CDS_0161 I K K W (124)
AcrIE1 D V -D
uvig_595114_CDS_0161 4 AcrIF25 0.54 View Alignment uvig_595114_CDS_0161 M K -E ---L -K T -L ----Y -K ----I ----------------------I -Y -D D -L K -D -S (60)
M + + +
AcrIF25 M D N D D K K P D A -L I H L R V P A -E V K G R W V K E S R L E G M K L T D W I T G R V E A K A -L -S I A -E -V -
uvig_595114_CDS_0161 -D -M L -I -G -Y A -K E L K ----E T ----N K P L A D M Y M A D A K S R -L --------A H S Q V M H K (120)
+ L R + + +
AcrIF25 L -E E -A -A -A M -A R S L -E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R
uvig_595114_CDS_0161 ----E F T G I V E K -M K G -E ----S -R ----G T E I A D C L W E E T H N H Y M E W Y E D L E N C I K -K - (180)
+ + R L+ +L K
AcrIF25 E G Y Q L L S S G L P D S Y S -G A V P N E -G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G
uvig_595114_CDS_0161 W (181)
AcrIF25 R
uvig_595114_CDS_0161 5 AcrIF3 0.50 View Alignment uvig_595114_CDS_0161 M -K E L K T -L -Y K -I -I Y D D L K D S D M L I G Y A ----K -----E -L K -E T -N K P L A D M Y M A D A (60)
M I + + I A +
AcrIF3 M S S T ---I -S D -R -I I S R S V I E A A R F I Q S W E D A D P D N L T E -S Q -V L -A A S S F A A R L H E G L
uvig_595114_CDS_0161 K S R -L A H S Q V --------M H K E F T G I -V E K -M K -G -E -------S -R ----G T E I -A D -C (120)
L + + + + +
AcrIF3 Q A T V L Q R L V D E S N R D E Y R E F Q A W E E A L -L N A -D G -R V T S N P F A D W G -W W Y R I A N V M L -A -
uvig_595114_CDS_0161 ---------L W E E -T H N H Y M E W Y E D L -E N C I K K --W (156)
H + M D +
AcrIF3 T A S Q N V G V A W G S -H V H G R L M A I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;