3D Structure for uvig_595114_CDS_0042 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.85 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_595114_CDS_0042 1 AcrIE6 0.72 View Alignment uvig_595114_CDS_0042 M K -F I S -K -Y A E ---W ----C -E -I -M D A -L -D S I -G -R -D ------Q P E I R A I L E K A A K (60)
M + D + ++ K +
AcrIE6 M N N D T E V -L E Q Q I K A F E L L A -D -E -L K D -R -L P T -L -E -I L S P M Y T A V M V T Y D L I G K Q L A
uvig_595114_CDS_0042 A I E E E ----L K I L H E E --G ---L K C -I S (88)
E L +K
AcrIE6 S R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_595114_CDS_0042 2 AcrIIC4 0.56 View Alignment uvig_595114_CDS_0042 M K -F ---I S K Y A ---E ------------------W -C E I -M D A L D S I -G -R -------D Q (60)
MK A + S +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L -F K S -A V E Q F S S -A -R -D F F K N E N Y S
uvig_595114_CDS_0042 ----P E I R -A -I L E K A A K A I E E E L K I L H E E G L K C I S (96)
++ A+ + + ++ G+
AcrIIC4 K E L A E K F N K -E A V N E A V E K L Q K A I D L A E K Q G I -Q -F
uvig_595114_CDS_0042 3 AcrIE1 0.55 View Alignment uvig_595114_CDS_0042 M -K ----F I S K Y -A ------E --------------W -------C E I M D A L D S I G -R D Q --(60)
M K A + + L + R
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E
uvig_595114_CDS_0042 --P E I R A -I L E K A A K A I E E E L K I L H E -E ----G L K ---C -I S (102)
+ ++ E + +
AcrIE1 E A E G A C -R N I D I M R A K W V E V C G E V N -Q H G I R V Y G D A I D R D V D
uvig_595114_CDS_0042 4 AcrIF23 0.52 View Alignment uvig_595114_CDS_0042 M -K F I S ---K Y A --------E --------W C ----E ----I M D A ----L -D S I G -R ----(60)
M F +
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N G Q W I D L E T G I A Y D P S Y -N Y A A N -T -R R A S -L S P R -G I D A R A
uvig_595114_CDS_0042 ----------------------D Q P E I R A I L ----E K A A -K -A I -E E E -L K -I L H E ---- (120)
E +
AcrIF23 V A K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A -C D -P -S G L -L T A -A K F W I E
uvig_595114_CDS_0042 -----------------------------E -----------G -L K C ---I -S (172)
AcrIF23 N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E -Y N A L T A R W G F
uvig_595114_CDS_0042 5 AcrIIA28 0.52 View Alignment uvig_595114_CDS_0042 M K -F I ---S -K ---Y A -E --------W -C -E -I -M D A -L D S I G -R ---D -------Q ---(60)
MK + D +
AcrIIA28 M K T I F T K K -Q T E E L L -N D I S I E K Q K E L F -N -S -M H D -F R S Q -H A -K E A R I P G W S D K Y N K L
uvig_595114_CDS_0042 -P E I R A I L E K A A K A I E E E -L K -I ---L H E E G L K C --I S (98)
E + + + K S
AcrIIA28 E K K M L S D F E E V T G I K Y D T L E -S -E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;