3D Structure for uvig_594657_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.96 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_594657_CDS_0006 1 AcrIE6 0.71 View Alignment uvig_594657_CDS_0006 M G D I N Y D E M L N N W Y D K V I A M A D K Y R D Q A D N Y E L G S K ---E Y -Y -K ----Y K R F A D G L Y M S (60)
M E L + + AD +D + + E+ S + +
AcrIE6 M N -N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M -V -T Y D L I G K Q L A S R R A E
uvig_594657_CDS_0006 L S M L S L E -E ----R R -A ---K -R K (84)
L + E +
AcrIE6 L I E I L E E Q -Y P G H A A D L S I K N L C P
uvig_594657_CDS_0006 2 AcrIIC4 0.58 View Alignment uvig_594657_CDS_0006 M G -D I -N Y D E --------M ----L N -N ----W Y D -K V I A M A D -K Y R -D Q A D ---N -Y -E -(60)
M N + A D
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K -N H R E P I K G -L F K S A V E -Q F S S A R D F F K -N -E -N
uvig_594657_CDS_0006 L G -S K E Y Y K Y K R F A D G L Y M S L S M L S L -E E R R -A -K --R K (99)
K + + L+ +
AcrIIC4 Y S K E L A E K F N K E A V N E A V E K L Q K A I D L -A E -K -Q G I Q -F
uvig_594657_CDS_0006 3 AcrIE1 0.58 View Alignment uvig_594657_CDS_0006 M G -D -I N ---Y D E ----M -------L -N -N ---W Y ----D -K -V -I -A -M -A -D -K -Y R D (60)
M
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S -L -E E A A S I L S L I V -F -Q -A -E -T -L -S -D -Q -A N
uvig_594657_CDS_0006 Q -A D N -Y E L G -S ---K -E -Y Y -K -Y K R F -A D G L Y M S L S M L S L E E ---R -R A --K -R K (117)
N ++ A +
AcrIE1 E L -A N Y I R R Q G L E E A E G -A C -R -N I D I -M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_594657_CDS_0006 4 AcrIF23 0.56 View Alignment uvig_594657_CDS_0006 M G -D I -N Y D --E -----M L N ----------------------------------------(60)
M D
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_594657_CDS_0006 ----------------N -----W ----Y --------D -K V -I A -M A D -K Y R -D Q A D -N -Y (120)
+
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E -K V Q Q M N Q D Q A E M A -C D -P -S G L -L T A A -K F W I -E -N R
uvig_594657_CDS_0006 E -L G S K E Y Y ----K -Y K -R F -A D -G -L Y -M S ---------L -S M L S L E -E -R R A K ---R -(180)
E + + +
AcrIF23 -N D S A Q E I A G F V M -Q -Q K A -L L -A -Q H -R S -A K A A G Q A D K -V A K I A A -E -Y N A -L T A R -W
uvig_594657_CDS_0006 -K (182)
AcrIF23 G F
uvig_594657_CDS_0006 5 AcrIIA28 0.55 View Alignment uvig_594657_CDS_0006 M G D -I ---N -Y D E M L N ----N -W Y D K V I A M A D K Y R -D Q A D N Y --E L G S ----K E Y Y K Y K R (60)
M +E LN + R A S K K
AcrIIA28 M K T I F T K K -Q T E E L L N D I S I -E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S
uvig_594657_CDS_0006 F A D G L Y -M -S -L S M L ----S L E -E R R A -K -R K (92)
+ + L +
AcrIIA28 D F E E V T G -I -K Y D T L E S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;