3D Structure for uvig_594657_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 93.96 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_594657_CDS_0006 1 AcrIE1 0.86 View Alignment uvig_594657_CDS_0006 M G -D -I N ---Y D E ----M -------L -N -N ---W Y ----D -K -V -I -A -M -A -D -K -Y R D (60)
M
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S -L -E E A A S I L S L I V -F -Q -A -E -T -L -S -D -Q -A N
uvig_594657_CDS_0006 Q -A D N -Y E L G -S ---K -E -Y Y -K -Y K R F -A D G L Y M S L S M L S L E E ---R -R A --K -R K (117)
N ++ A +
AcrIE1 E L -A N Y I R R Q G L E E A E G -A C -R -N I D I -M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_594657_CDS_0006 2 AcrIE6 0.85 View Alignment uvig_594657_CDS_0006 M G D I N Y D E M L N N W Y D K V I A M A D K Y R D Q A D N Y E L G S K ---E Y -Y -K ----Y K R F A D G L Y M S (60)
M E L + + AD +D + + E+ S + +
AcrIE6 M N -N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M -V -T Y D L I G K Q L A S R R A E
uvig_594657_CDS_0006 L S M L S L E -E ----R R -A ---K -R K (84)
L + E +
AcrIE6 L I E I L E E Q -Y P G H A A D L S I K N L C P
uvig_594657_CDS_0006 3 AcrIIA34 0.83 View Alignment uvig_594657_CDS_0006 M G -D I -N Y D E M L N -------------N W Y D -------K V -I -A -M -A -D -K -Y R D Q A D N Y (60)
M +
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K S I M R K I K A L T D Q F E T -M -D -D -L -I -D -S L N S Y -A D T
uvig_594657_CDS_0006 E L G -S -K -E -Y Y K Y K R F A D G L Y M S L S M ------L -----------S -L ------------(120)
Y A + +
AcrIIA34 ---H -Y -T -W A I T Y F Q L A R I I I S F Q A S N N T T S E K K I D L Q S G P I E V N G K L K I R V T V D E F M A
uvig_594657_CDS_0006 -----E ----E -R R A ---K R K (141)
E +++
AcrIIA34 D L A N W E H L E D -I K K L A K E -L A
uvig_594657_CDS_0006 4 AcrIIA19 0.83 View Alignment uvig_594657_CDS_0006 M G D -I N -Y D E ----M L N ---------------N --------W ----Y --------D ----(60)
M + E L
AcrIIA19 M K L I V E V E -E T N Y K N L V N Y T K L T N E S H N I L V N -R L I S E Y I T K P Y E L R L D L S E R Y S -N R D L
uvig_594657_CDS_0006 -K V I A M A D K -Y R D Q A D N ---Y ----E L G ---S K E Y -Y K -Y K R F A D G L Y M S L S M L S ----L (120)
M+ ++ + + + + + + +
AcrIIA19 I E F K F M L I E Y C K E A L Q D I K E -L A N S D E A Y E T D E A F E A -V F R Q L F E E V I S N P D T V L K A F H -
uvig_594657_CDS_0006 -E E R -R A -K R K (131)
+ K
AcrIIA19 S -Y T S F L E E N K
uvig_594657_CDS_0006 5 AcrIF15 0.82 View Alignment uvig_594657_CDS_0006 M G D I N -Y D E M L N N W Y D K V I A M A D -----K -Y R D Q -A D N Y E L G -S K E Y Y K Y K R F A D G L Y M S (60)
M I+ E N + + M++ + +
AcrIF15 M T T I T I A Y E V S N D K V E T I K T M V E S Q Q I H -N V N F -N -G E E F T I E R G D F T S I D K D E A E H V K L
uvig_594657_CDS_0006 L S M L S L E E R R A K R K (74)
L+ ++ +
AcrIF15 L N K I Q D I -I H G Y -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;