3D Structure for uvig_594105_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_594105_CDS_0029 1 AcrIIA27 0.73 View Alignment uvig_594105_CDS_0029 M G -F A I R I W -R ----Y ----F D N E M T Y F V Q E T N E E R A K Q K A Y Q R A K E T F N C G M P D T -L -E (60)
M F I + Y V N A KA + +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S -K W K F -N M -R -
uvig_594105_CDS_0029 E F E K Q D N F ----G G I E V D A K I D Q I I L (86)
+ DN G ++++ +
AcrIIA27 D L T A I D N T H R R A W G R -R Y L R V E -E -A
uvig_594105_CDS_0029 2 AcrIE2 0.69 View Alignment uvig_594105_CDS_0029 M G F -A I R I W R Y F -D N E M -T -Y -F -V Q -E T N E E R A K Q K A Y Q R A K E T F N C G M P D T L E E F E K Q (60)
M +I + + AK+ A Q + E F E +
AcrIE2 M N T Y L I D P R K N N D N S G E R -F -T -V -D A V D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G S
uvig_594105_CDS_0029 D N F G G I E V -------D ---A K I D Q I -I L (88)
F + + L
AcrIE2 G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
uvig_594105_CDS_0029 3 AcrIC9 0.60 View Alignment uvig_594105_CDS_0029 M -G --F -A I R I W R Y F D N E M -T Y F V Q E T N E E R A K Q K A Y -Q R A K E T F N ---C G M -P D -T -L E (60)
M +I Y + + ++ + +
AcrIC9 M E T K M T S F Y K I T A Y N -S Q A L Y F W G ---T D A D V D R Y -V D -W L N R D R E I N V Y A -A E A I -P E A
uvig_594105_CDS_0029 E F E K Q D N F G G I E V ---D A K --I -D ---Q I I L (91)
E+ + + D ++ +
AcrIC9 E W A Q Y E G R ---D D V L S G E E C G -W D D F M S A E A
uvig_594105_CDS_0029 4 AcrIIC5 0.59 View Alignment uvig_594105_CDS_0029 M G F A I R I W R Y F -D N E -M T -Y F V Q E T N E E R A K Q K A Y Q -------------R A K E T F N C G M P (60)
M ++ + ++ E A E
AcrIIC5 M N N S -I K F H V S Y -D G T -A R A -L -F N T K E Q A E K Y C L V E E I N D E M N G Y K R K S W E E K L R E E N C
uvig_594105_CDS_0029 D T L E E F E K Q -D N F G ---G I E V -------------------------------------D -(120)
++ ++ + +
AcrIIC5 A S V Q D W V E K N -Y T S S Y S D L F N I C E I E V S S A G Q L V K I D N T E V D D F V E N C Y G F T L E D D L E E F
uvig_594105_CDS_0029 A -----K -I ----D -Q I -I L (140)
AcrIIC5 -N K A K Q -Y -L Q K F Y A -E C E N
uvig_594105_CDS_0029 5 AcrIIC1 0.59 View Alignment uvig_594105_CDS_0029 M G -F A I R I -W -R Y F D -N -E M T Y F V Q E T N ---E E R A K Q K A Y Q ------R A K E -T -F N C G M P (60)
M +I D + N + + +A G
AcrIIC1 M A N K T Y K I G K N A G Y D G -C G L C L A A I S E N E A I K V K Y L R D I C P D Y D G D D K A E -D -W L R W G T D
uvig_594105_CDS_0029 D T -L -E E F -E -K Q D N F G G I E -V -D A K I D Q I I -L (93)
++ V A + L
AcrIIC1 S R V -K A A -A -L E M E Q Y A Y T -S V G M A S C W E F V E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;